RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 DLGAP1O14490 977 aa11.73□□□□□ -0.53
SMG5-204ENST00000476954 IGF1P05019 195 aa11.73□□□□□ -0.53
SMG5-204ENST00000476954 GNG10P50151 68 aa11.73□□□□□ -0.53
SMG5-204ENST00000476954 RAB7AP51149 207 aa11.73□□□□□ -0.53
SMG5-204ENST00000476954 MFGE8Q08431 387 aaPredicted RBP11.73□□□□□ -0.53
SMG5-204ENST00000476954 LINC00322Q6ZN03 302 aaPredicted RBP11.73□□□□□ -0.53
SMG5-204ENST00000476954 CROCCP2Q86T23 111 aa11.73□□□□□ -0.53
SMG5-204ENST00000476954 COQ2Q96H96 371 aa11.73□□□□□ -0.53
SMG5-204ENST00000476954 RASL11BQ9BPW5 248 aa11.73□□□□□ -0.53
SMG5-204ENST00000476954 RSRP1Q9BUV0 290 aa11.73□□□□□ -0.53
SMG5-204ENST00000476954 OR51V1Q9H2C8 321 aa11.73□□□□□ -0.53
SMG5-204ENST00000476954 ARMC1Q9NVT9 282 aa11.73□□□□□ -0.53
SMG5-204ENST00000476954 CEPT1Q9Y6K0 416 aa11.73□□□□□ -0.53
SMG5-204ENST00000476954 PKHD1P08F94 4074 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 A0A0G2JND7 137 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 ZNF736B4DX44 427 aaPredicted RBP11.72□□□□□ -0.53
SMG5-204ENST00000476954 MPZL2O60487 215 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 ENTPD6O75354 484 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 SOX14O95416 240 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 IGLV1-40P01703 118 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 TTRP02766 147 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 IFNGR2P38484 337 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 KIR3DL2P43630 455 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 RAB9AP51151 201 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 SMIM11AP58511 58 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 LTC4SQ16873 150 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 RPL13AP3Q6NVV1 102 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 ZNF454Q8N9F8 522 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 CASTOR1Q8WTX7 329 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 RCN3Q96D15 328 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 MNTQ99583 582 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 BTBD10Q9BSF8 475 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 TOLLIPQ9H0E2 274 aa11.72□□□□□ -0.53
SMG5-204ENST00000476954 SEBOXQ9HB31 216 aaPredicted RBP11.72□□□□□ -0.53
SMG5-204ENST00000476954 IGHV1-3A0A0C4DH29 117 aa11.71□□□□□ -0.53
SMG5-204ENST00000476954 RIIAD1A6NNX1 92 aa11.71□□□□□ -0.53
SMG5-204ENST00000476954 HSD17B6O14756 317 aa11.71□□□□□ -0.53
SMG5-204ENST00000476954 BCL3P20749 454 aa11.71□□□□□ -0.53
SMG5-204ENST00000476954 RRM2P31350 389 aa11.71□□□□□ -0.53
SMG5-204ENST00000476954 SOX6P35712 828 aa11.71□□□□□ -0.53
SMG5-204ENST00000476954 F2RL1P55085 397 aa11.71□□□□□ -0.53
SMG5-204ENST00000476954 ANKRD13BQ86YJ7 626 aa11.71□□□□□ -0.53
SMG5-204ENST00000476954 IZUMO1Q8IYV9 350 aa11.71□□□□□ -0.53
SMG5-204ENST00000476954 OR14K1Q8NGZ2 314 aa11.71□□□□□ -0.53
SMG5-204ENST00000476954 OR2T10Q8NGZ9 312 aa11.71□□□□□ -0.53
SMG5-204ENST00000476954 RP9Q8TA86 221 aaKnown RBP11.71□□□□□ -0.53
SMG5-204ENST00000476954 THAP7Q9BT49 309 aaPredicted RBP11.71□□□□□ -0.53
SMG5-204ENST00000476954 TTTY10Q9BZA0 68 aa11.71□□□□□ -0.53
SMG5-204ENST00000476954 PPIL3Q9H2H8 161 aaKnown RBP11.71□□□□□ -0.53
SMG5-204ENST00000476954 GLS2Q9UI32 602 aa11.71□□□□□ -0.53
SMG5-204ENST00000476954 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.71□□□□□ -0.531e-6■□□□□ 10.1
SMG5-204ENST00000476954 STUB1Q9UNE7 303 aa11.71□□□□□ -0.53
SMG5-204ENST00000476954 DNAH11Q96DT5 4516 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 A0A1B0GTI1 187 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 ACOD1A6NK06 481 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 ZNF729A6NN14 1252 aaPredicted RBP11.7□□□□□ -0.54
SMG5-204ENST00000476954 OR2H2O95918 312 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 IFNGP01579 166 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 SEMG1P04279 462 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 ZNF3P17036 446 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 PRKACAP17612 351 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 ALOX5APP20292 161 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 EWSR1Q01844 656 aaKnown RBP eCLIP11.7□□□□□ -0.54
SMG5-204ENST00000476954 RASSF6Q6ZTQ3 369 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 FAM58AQ8N1B3 248 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 PLEKHA3Q9HB20 300 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 TMBIM4Q9HC24 238 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 FAM53CQ9NYF3 392 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 NUFIP1Q9UHK0 495 aaKnown RBP11.7□□□□□ -0.54
SMG5-204ENST00000476954 V9GYS6 101 aa11.7□□□□□ -0.54
SMG5-204ENST00000476954 KBTBD11-OT1A0A1B0GTJ5 212 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 GASTP01350 101 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 CGB3P0DN86 165 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 CGB7P0DN87 165 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 SLC2A2P11168 524 aaPredicted RBP11.69□□□□□ -0.54
SMG5-204ENST00000476954 ZNF146Q15072 292 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 UBE2V2Q15819 145 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 KRBOX4Q5JUW0 171 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 SAMD4BQ5PRF9 694 aaKnown RBP11.69□□□□□ -0.54
SMG5-204ENST00000476954 METTL21CQ5VZV1 264 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 ENTHD1Q8IYW4 607 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 PGAM4Q8N0Y7 254 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 IQCF1Q8N6M8 205 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 OR2T33Q8NG76 320 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 HAVCR2Q8TDQ0 301 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 RNF166Q96A37 237 aaPredicted RBP11.69□□□□□ -0.54
SMG5-204ENST00000476954 CHCHD6Q9BRQ6 235 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 CMC2Q9NRP2 79 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 ZNF107Q9UII5 783 aaPredicted RBP11.69□□□□□ -0.54
SMG5-204ENST00000476954 ZNF580Q9UK33 172 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 GTF2A1LQ9UNN4 478 aa11.69□□□□□ -0.54
SMG5-204ENST00000476954 FAM90A10PA6NDY2 464 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 ATP6V0E1O15342 81 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 IGHV3-11P01762 117 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 LGALS1P09382 135 aaKnown RBP11.68□□□□□ -0.54
SMG5-204ENST00000476954 OR5H8P0DN80 308 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 MED14OSP0DP75 135 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 SCN1BQ07699 218 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 ZNF816Q0VGE8 651 aaPredicted RBP11.68□□□□□ -0.54
SMG5-204ENST00000476954 SF3A3Q12874 501 aaKnown RBP eCLIP11.68□□□□□ -0.543e-33■■■■□ 24.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms