RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 KMT5CQ86Y97 462 aa12.02□□□□□ -0.48
HDAC1-206ENST00000476391 BCORP1Q8N888 145 aa12.02□□□□□ -0.48
HDAC1-206ENST00000476391 SLC2A9Q9NRM0 540 aa12.02□□□□□ -0.48
HDAC1-206ENST00000476391 CENPMQ9NSP4 180 aa12.02□□□□□ -0.48
HDAC1-206ENST00000476391 UQCR10Q9UDW1 63 aa12.02□□□□□ -0.48
HDAC1-206ENST00000476391 TRAPPC1Q9Y5R8 145 aa12.02□□□□□ -0.48
HDAC1-206ENST00000476391 PXMP4Q9Y6I8 212 aa12.02□□□□□ -0.48
HDAC1-206ENST00000476391 MSTNO14793 375 aa12.02□□□□□ -0.49
HDAC1-206ENST00000476391 IGHMP01871 453 aa12.02□□□□□ -0.49
HDAC1-206ENST00000476391 ESDP10768 282 aa12.02□□□□□ -0.49
HDAC1-206ENST00000476391 OR4C5Q8NGB2 326 aa12.02□□□□□ -0.49
HDAC1-206ENST00000476391 OR14C36Q8NHC7 312 aa12.02□□□□□ -0.49
HDAC1-206ENST00000476391 ADAMTS18Q8TE60 1221 aa12.02□□□□□ -0.49
HDAC1-206ENST00000476391 TOMM40LQ969M1 308 aa12.02□□□□□ -0.49
HDAC1-206ENST00000476391 SPACA7Q96KW9 195 aa12.02□□□□□ -0.49
HDAC1-206ENST00000476391 GPER1Q99527 375 aa12.02□□□□□ -0.49
HDAC1-206ENST00000476391 SPIN2AQ99865 258 aa12.02□□□□□ -0.49
HDAC1-206ENST00000476391 SPIN2BQ9BPZ2 258 aa12.02□□□□□ -0.49
HDAC1-206ENST00000476391 SLC46A2Q9BY10 475 aa12.02□□□□□ -0.49
HDAC1-206ENST00000476391 MANBALQ9NQG1 85 aa12.02□□□□□ -0.49
HDAC1-206ENST00000476391 PRRC2BQ5JSZ5 2229 aaKnown RBP12.02□□□□□ -0.49
HDAC1-206ENST00000476391 CCDC85CA6NKD9 419 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 F6UZH7 168 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 MT-ATP6P00846 226 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 GCH1P30793 250 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 RPS20P60866 119 aaKnown RBP12.01□□□□□ -0.49
HDAC1-206ENST00000476391 SRPXP78539 464 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 LINC00346Q8IVM7 164 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 TMEFF1Q8IYR6 380 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 VN1R17PQ8TDU5 208 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 WDYHV1Q96HA8 205 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 TIMM29Q9BSF4 260 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 LIME1Q9H400 295 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 RPRMQ9NS64 109 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 NECAP2Q9NVZ3 263 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 CCL26Q9Y258 94 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 CPAMD8Q8IZJ3 1885 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 ATG2AQ2TAZ0 1938 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 TRAV36DV7A0A075B6V5 113 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 TMEM250H0YL14 139 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 CST7O76096 145 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 ONECUT2O95948 504 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 CLEC12BQ2HXU8 276 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 DNM1P34Q6PK57 102 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 CPEB2Q7Z5Q1 589 aaKnown RBP12.01□□□□□ -0.49
HDAC1-206ENST00000476391 ODF3L1Q8IXM7 274 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 GATSQ8NAP1 163 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 SSC4DQ8WTU2 575 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 TM2D1Q9BX74 207 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 KIR3DX1Q9H7L2 352 aa12.01□□□□□ -0.49
HDAC1-206ENST00000476391 IGHV2OR16-5A0A0B4J2B6 119 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 A0A1W2PRU2 124 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 A6NCN8 305 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 OR6C6A6NF89 314 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 ANKUB1A6NFN9 424 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 LRRC3CA6NJW4 275 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 SSSCA1O60232 199 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 CTRLP40313 264 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 CD226Q15762 336 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 FBLN7Q53RD9 439 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 LY6G5CQ5SRR4 150 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 TSPO2Q5TGU0 170 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 LCN15Q6UWW0 184 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 SLC38A9Q8NBW4 561 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 MCTS1Q9ULC4 181 aaKnown RBP12□□□□□ -0.49
HDAC1-206ENST00000476391 KIAA2026Q5HYC2 2103 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 DUXBA0A1W2PPF3 345 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 PHF1O43189 567 aaPredicted RBP12□□□□□ -0.49
HDAC1-206ENST00000476391 LATO43561 262 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 BMP5P22003 454 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 IL3RAP26951 378 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 MPLP40238 635 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 RPL19P84098 196 aaKnown RBP12□□□□□ -0.49
HDAC1-206ENST00000476391 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 SHISA5Q8N114 240 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 TMEM217Q8N7C4 229 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 CCDC71LQ8N9Z2 235 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 OR5D18Q8NGL1 313 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 OR5L1Q8NGL2 311 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 NUDT11Q96G61 164 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 CCDC74BQ96LY2 380 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 MOB1AQ9H8S9 216 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 B3GALT1Q9Y5Z6 326 aa12□□□□□ -0.49
HDAC1-206ENST00000476391 PCNX3Q9H6A9 2034 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 NKX2-6A6NCS4 301 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 TRAPPC6AO75865 159 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 CNOT4O95628 575 aaKnown RBP11.99□□□□□ -0.49
HDAC1-206ENST00000476391 IFNA5P01569 189 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 CD33P20138 364 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 COMPP49747 757 aaPredicted RBP11.99□□□□□ -0.49
HDAC1-206ENST00000476391 MEF2BQ02080 365 aaPredicted RBP11.99□□□□□ -0.49
HDAC1-206ENST00000476391 EIF3IQ13347 325 aaKnown RBP11.99□□□□□ -0.49
HDAC1-206ENST00000476391 RTP5Q14D33 572 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 PHLDA2Q53GA4 152 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 PRSS41Q7RTY9 318 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 CA13Q8N1Q1 262 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 D2HGDHQ8N465 521 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 OR56B2PQ8NGI1 322 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 PTRH2Q9Y3E5 179 aaKnown RBP11.99□□□□□ -0.49
HDAC1-206ENST00000476391 PPIAL4AQ9Y536 164 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms