RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 CHTF8P0CG12 524 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 SLC2A1P11166 492 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 F2RP25116 425 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 PSMB5P28074 263 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 HTR1DP28221 377 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 HCAR3P49019 387 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 IDH3GP51553 393 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 RND2P52198 227 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR4D2P58180 307 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR12D2P58182 307 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 CRADDP78560 199 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 CCL7P80098 99 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 DYNC1I2Q13409 638 aaKnown RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 GPNMBQ14956 572 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZBTB6Q15916 424 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 SGCAQ16586 387 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 LRRC26Q2I0M4 334 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 KIF26BQ2KJY2 2108 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 ACSM3Q53FZ2 586 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR10J3Q5JRS4 329 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 COA6Q5JTJ3 125 aaKnown RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 SPIN3Q5JUX0 258 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 TIMM23BQ5SRD1 257 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 HACD4Q5VWC8 232 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 FAM131AQ6UXB0 335 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 PAMR1Q6UXH9 720 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 WDR82Q6UXN9 313 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 ALKAL1Q6UXT8 129 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 CLEC20AQ6ZU45 233 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 LINC00173Q6ZV60 143 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 TMED4Q7Z7H5 227 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 TAC4Q86UU9 113 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 SLC30A8Q8IWU4 369 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 TMEM156Q8N614 296 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 C14orf178Q8N769 122 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 UBL4BQ8N7F7 174 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 ACBD4Q8NC06 268 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 TMEM35BQ8NCS4 154 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR4K2Q8NGD2 314 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 LRRC29Q8WV35 223 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 RASSF5Q8WWW0 418 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 RAD51AP1Q96B01 352 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 FLYWCH2Q96CP2 140 aaKnown RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 YIPF6Q96EC8 236 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 TMA16Q96EY4 203 aaKnown RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 C16orf74Q96GX8 76 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 C1orf147Q96MC9 270 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 KCTD7Q96MP8 289 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 ATOH8Q96SQ7 321 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 KLF6Q99612 283 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 APOL4Q9BPW4 351 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 SNRNP25Q9BV90 132 aaKnown RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 NXF2Q9GZY0 626 aaKnown RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 UGT1A7Q9HAW7 530 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 UGT1A8Q9HAW9 530 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 ABCB9Q9NP78 766 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 SLCO1B3Q9NPD5 702 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZDHHC4Q9NPG8 344 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 ACOT13Q9NPJ3 140 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 C19orf12Q9NSK7 152 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 DNAJC27Q9NZQ0 273 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 COMMD9Q9P000 198 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 Q9UF83 564 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 OPN4Q9UHM6 478 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZNF107Q9UII5 783 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 ARL5AQ9Y689 179 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 CROCCQ5TZA2 2017 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZFC3H1O60293 1989 aaKnown RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 COL4A4P53420 1690 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 TICRRQ7Z2Z1 1910 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 PCM1Q15154 2024 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 TP53BP1Q12888 1972 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 hCG_1818297A0A087WSY0 165 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 TRAV39A0A0B4J263 110 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 GNG14A0A1W2PPG7 69 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 SYCE1LA8MT33 242 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 CCRL2O00421 344 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 CCL22O00626 93 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 SLC31A2O15432 143 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 MFSD11O43934 449 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 ENTPD6O75354 484 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 SUPT7LO94864 414 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 BRI3O95415 125 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 HMGN1P05114 100 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 CDK1P06493 297 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 EIF4EP06730 217 aaKnown RBP2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 GNAO1P09471 354 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR5AL1P0C617 328 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 LIMS3P0CW19 117 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 LIMS4P0CW20 117 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 LIPCP11150 499 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 IGFBP3P17936 291 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 ME2P23368 584 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 CFL1P23528 166 aaKnown RBP2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 KDELR1P24390 212 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 PSMA1P25786 263 aaKnown RBP2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 PSMB9P28065 219 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 ALDH3A1P30838 453 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 GPX4P36969 197 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 STC1P52823 247 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms