RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 FAM90A16PA6NEW6 464 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 FAM90A20PA6NIJ5 464 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 ZSCAN5BA6NJL1 495 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 FAM90A8PA6NJQ4 464 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 FAM90A7PA6NKC0 464 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 FAM90A22PA8MWA6 464 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 FAM90A12PA8MX19 464 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 FAM90A5PA8MXJ8 464 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 FAM90A23PA8MXZ1 464 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 H0YL77 283 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 GABARAPH6UMI1 98 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 RAB27BO00194 218 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 GSTZ1O43708 216 aaPredicted RBP12.95□□□□□ -0.34
SF3A3-203ENST00000461869 PTBP3O95758 552 aaKnown RBP12.95□□□□□ -0.34
SF3A3-203ENST00000461869 IGKV1D-12P01611 117 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 ADH4P08319 380 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 ACAA1P09110 424 aaPredicted RBP12.95□□□□□ -0.34
SF3A3-203ENST00000461869 FAM90A15PP0C7V4 464 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 FAM90A13PP0C7W8 464 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 FAM90A14PP0C7W9 464 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 FAM90A24PP0C7X0 464 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 IL7P13232 177 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 VEGFCP49767 419 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 FGF12P61328 243 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 SCN1BQ07699 218 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 RBMS3Q6XE24 437 aaKnown RBP12.95□□□□□ -0.34
SF3A3-203ENST00000461869 SNX29P2Q8IUI4 249 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 IZUMO1Q8IYV9 350 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 FAM89BQ8N5H3 189 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 SCCPDHQ8NBX0 429 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 OR10R2Q8NGX6 335 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 GTF3AQ92664 365 aaKnown RBP12.95□□□□□ -0.34
SF3A3-203ENST00000461869 ABHD1Q96SE0 405 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 SDHCQ99643 169 aaPredicted RBP12.95□□□□□ -0.34
SF3A3-203ENST00000461869 GAL3ST1Q99999 423 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 SAP30LQ9HAJ7 183 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 SCPEP1Q9HB40 452 aa12.95□□□□□ -0.34
SF3A3-203ENST00000461869 A0A1W2PP11 408 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 A6NLC8 198 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 F5H5P2 479 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 SULT1C2O00338 296 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 FSHBP01225 129 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 HLA-DQB1P01920 261 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 GRPP07492 148 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 GSTP1P09211 210 aaKnown RBP12.94□□□□□ -0.34
SF3A3-203ENST00000461869 RBM11P57052 281 aaKnown RBP12.94□□□□□ -0.34
SF3A3-203ENST00000461869 LCN2P80188 198 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 MADCAM1Q13477 382 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 PDLIM3Q53GG5 364 aaPredicted RBP12.94□□□□□ -0.34
SF3A3-203ENST00000461869 FIP1L1Q6UN15 594 aaKnown RBP12.94□□□□□ -0.34
SF3A3-203ENST00000461869 WDR86Q86TI4 376 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 SIGLECL1Q8N7X8 197 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 DTX3Q8N9I9 347 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 C19orf18Q8NEA5 215 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 SETD6Q8TBK2 473 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 FCAMRQ8WWV6 532 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 CCL17Q92583 94 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 RAB3CQ96E17 227 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 IL19Q9UHD0 177 aa12.94□□□□□ -0.34
SF3A3-203ENST00000461869 SPRY3O43610 288 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 SYNGR1O43759 233 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 NOS1APO75052 506 aaPredicted RBP12.93□□□□□ -0.34
SF3A3-203ENST00000461869 SFTPBP07988 381 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 CD55P08174 381 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 PGA5P0DJD9 388 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 BCL3P20749 454 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 PRSS3P35030 304 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 GATA4P43694 442 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 AP3S2P59780 193 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 DEFA6Q01524 100 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 SSBP1Q04837 148 aaKnown RBP12.93□□□□□ -0.34
SF3A3-203ENST00000461869 MAB21L1Q13394 359 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 IL13RA2Q14627 380 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 MPV17LQ2QL34 196 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 FAM209AQ5JX71 171 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 LYSMD2Q8IV50 215 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 POC1AQ8NBT0 407 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 CHST4Q8NCG5 386 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 EMG1Q92979 244 aaKnown RBP12.93□□□□□ -0.34
SF3A3-203ENST00000461869 ERGIC1Q969X5 290 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 MEGF10Q96KG7 1140 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 OR2V2Q96R30 315 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 NICN1Q9BSH3 213 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 AUNIPQ9H7T9 357 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 FN3KRPQ9HA64 309 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.93□□□□□ -0.34
SF3A3-203ENST00000461869 MTCH1Q9NZJ7 389 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 ST3GAL6Q9Y274 331 aa12.93□□□□□ -0.34
SF3A3-203ENST00000461869 CDIPTO14735 213 aa12.92□□□□□ -0.34
SF3A3-203ENST00000461869 LPLP06858 475 aa12.92□□□□□ -0.34
SF3A3-203ENST00000461869 HIST1H1DP16402 221 aaKnown RBP12.92□□□□□ -0.34
SF3A3-203ENST00000461869 GABRR1P24046 479 aa12.92□□□□□ -0.34
SF3A3-203ENST00000461869 PRTN3P24158 256 aa12.92□□□□□ -0.34
SF3A3-203ENST00000461869 ACTBP60709 375 aa12.92□□□□□ -0.34
SF3A3-203ENST00000461869 TNFAIP6P98066 277 aaPredicted RBP12.92□□□□□ -0.34
SF3A3-203ENST00000461869 BAK1Q16611 211 aa12.92□□□□□ -0.34
SF3A3-203ENST00000461869 PNLIPRP3Q17RR3 467 aa12.92□□□□□ -0.34
SF3A3-203ENST00000461869 RGS21Q2M5E4 152 aa12.92□□□□□ -0.34
SF3A3-203ENST00000461869 STEAP3Q658P3 488 aa12.92□□□□□ -0.34
SF3A3-203ENST00000461869 Q6ZTK2 550 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms