RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 RNASEH2CQ8TDP1 164 aaKnown RBP11.89□□□□□ -0.51
PTPRE-204ENST00000455661 LMX1AQ8TE12 382 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 DYRK2Q92630 601 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 SMOC1Q9H4F8 434 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 CERS4Q9HA82 394 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 F5P12259 2224 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 TRAV1-1A0A0B4J248 108 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 A8MWP6 167 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 M0R135 149 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 ATXN7O15265 892 aaPredicted RBP11.89□□□□□ -0.51
PTPRE-204ENST00000455661 CEACAM6P40199 344 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 CLDN17P56750 224 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 TAS2R30P59541 319 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 BRICD5Q6PL45 260 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 SHISA6Q6ZSJ9 500 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 POC1BQ8TC44 478 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 SPTSSAQ969W0 71 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 ZNF799Q96GE5 643 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 ATP5SQ99766 215 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 CTDSP1Q9GZU7 261 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 CALHM2Q9HA72 323 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 CISD1Q9NZ45 108 aaKnown RBP11.89□□□□□ -0.51
PTPRE-204ENST00000455661 ZNF814B7Z6K7 855 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 PPYP01298 95 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 OR8B8Q15620 311 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 CXorf66Q5JRM2 361 aaPredicted RBP11.88□□□□□ -0.51
PTPRE-204ENST00000455661 SLC25A24Q6NUK1 477 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 H1FOOQ8IZA3 346 aaPredicted RBP11.88□□□□□ -0.51
PTPRE-204ENST00000455661 TMEM123Q8N131 208 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 OR10A7Q8NGE5 316 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 TMEM56Q96MV1 263 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 NDUFAF3Q9BU61 184 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 ZNF581Q9P0T4 197 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 LRFN1Q9P244 771 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 TMEM56-RWDD3S4R434 201 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 A0A1B0GX78 115 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 ADAM20O43506 726 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 DFFBO76075 338 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 IFNA5P01569 189 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 CA3P07451 260 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 GZMBP10144 247 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 IL24Q13007 206 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 MALLQ13021 153 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 SPIN3Q5JUX0 258 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 FAM90A2PQ658T7 463 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 TGIF2LXQ8IUE1 241 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 OSR2Q8N2R0 312 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 BEND2Q8NDZ0 799 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 BORCS8Q96FH0 119 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 IER2Q9BTL4 223 aa11.88□□□□□ -0.51
PTPRE-204ENST00000455661 ACTR3CQ9C0K3 210 aaPredicted RBP11.88□□□□□ -0.51
PTPRE-204ENST00000455661 ZFP92A6NM28 416 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 EPHA1P21709 976 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 TBC1D26Q86UD7 250 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 WDR5BQ86VZ2 330 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 DTX1Q86Y01 620 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 SELENOHQ8IZQ5 122 aaKnown RBP11.87□□□□□ -0.51
PTPRE-204ENST00000455661 METTL7AQ9H8H3 244 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 CDH20Q9HBT6 801 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 SDF2L1Q9HCN8 221 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 PLEK2Q9NYT0 353 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 MYO7BQ6PIF6 2116 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 DUXBA0A1W2PPF3 345 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 SHISA7A6NL88 538 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 AQP7P3A6NL99 342 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 BCL2P10415 239 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 ZNF154Q13106 437 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 ENDOGQ14249 297 aaKnown RBP11.87□□□□□ -0.51
PTPRE-204ENST00000455661 SHBQ15464 509 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 OR8G1Q15617 311 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 PIGYQ3MUY2 71 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 TMEM211Q6ICI0 200 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 LHFPL2Q6ZUX7 228 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 THNSL2Q86YJ6 484 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 OR4X1Q8NH49 305 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 NEU1Q99519 415 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 SRD5A3Q9H8P0 318 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 PLSCR2Q9NRY7 297 aa11.87□□□□□ -0.51
PTPRE-204ENST00000455661 SEC16AO15027 2179 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 LOC102725191A0A1B0GVB3 256 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 C10orf142B7Z368 130 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 CHST1O43916 411 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 OTX1P32242 354 aaPredicted RBP11.86□□□□□ -0.51
PTPRE-204ENST00000455661 ID3Q02535 119 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 EXT1Q16394 746 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 RSPO1Q2MKA7 263 aaPredicted RBP11.86□□□□□ -0.51
PTPRE-204ENST00000455661 MPV17LQ2QL34 196 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 CDCP2Q5VXM1 449 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 ZNF664Q8N3J9 261 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 OR1P1Q8NH06 330 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 P2RX4Q99571 388 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 ST3GAL6Q9Y274 331 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 CCDC163A0A0D9SF12 145 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 A0A1W2PPC4 97 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 ZNF705GA8MUZ8 300 aaPredicted RBP11.86□□□□□ -0.51
PTPRE-204ENST00000455661 CYTIPO60759 359 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 PDCD6O75340 191 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 OR2J2O76002 312 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 GCGP01275 180 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 AMBPP02760 352 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 418.2 ms