RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 KCNE1BA0A087WTH5 132 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 IGKV2-40A0A087WW87 121 aaPredicted RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 FAM240AA0A1B0GVK7 77 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 MDFIC2A0A1B0GVS7 189 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 DHRS12A0PJE2 317 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 GOLGA8OA6NCC3 632 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 C11orf86A6NJI1 115 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 SLC22A20A6NK97 555 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 RFPL4AA6NLU0 287 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 ZNF705FA8MVS1 300 aaPredicted RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 A8MWP6 167 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 HACD1B0YJ81 288 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 C9J4A7 227 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 RFPL4AL1F8VTS6 287 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 GOLGA8NF8WBI6 632 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 H3BP45 60 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 TRDMT1O14717 391 aaKnown RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 PGLYRP1O75594 196 aaPredicted RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 SOX14O95416 240 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 TTC4O95801 387 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 GCGP01275 180 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 IGKV2D-40P01614 121 aaPredicted RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 GYPCP04921 128 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 IGKV5-2P06315 115 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 GUSBP08236 651 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 UBCP0CG48 685 aaKnown RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 CD36P16671 472 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 EIF2S2P20042 333 aaKnown RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 MSR1P21757 451 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 ARL2P36404 184 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 GPR1P46091 355 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 HINT1P49773 126 aaPredicted RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 RPL14P50914 215 aaKnown RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 PLTPP55058 493 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 ZNF117Q03924 483 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 SLC38A11Q08AI6 406 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 SKP2Q13309 424 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 CDK5R1Q15078 307 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 SURF2Q15527 256 aaPredicted RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 OR8G1Q15617 311 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 UAP1Q16222 522 aaPredicted RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 SSX2Q16385 188 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 C5orf64Q2M2E5 130 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 CEACAM21Q3KPI0 293 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 Q499Y3 187 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 ACTBL2Q562R1 376 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 TTMPQ5BVD1 217 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 UBE2NLQ5JXB2 153 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 HES3Q5TGS1 186 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 GLYATQ6IB77 296 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 OTUD6AQ7L8S5 288 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 FAM19A3Q7Z5A8 133 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 SCD5Q86SK9 330 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 LRRC28Q86X40 367 aaPredicted RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 RBM45Q8IUH3 476 aaKnown RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 TBC1D21Q8IYX1 336 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 FAM58AQ8N1B3 248 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 TRAM1L1Q8N609 369 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 KRTCAP2Q8N6L1 136 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 OR6K3Q8NGY3 331 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 ERMNQ8TAM6 284 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 NDNFQ8TB73 568 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 UBA3Q8TBC4 463 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 CD200R1Q8TD46 325 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 KCTD4Q8WVF5 259 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 PIH1D2Q8WWB5 315 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 OR8D1Q8WZ84 308 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 TMBIM1Q969X1 311 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 REEP6Q96HR9 211 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 YPEL4Q96NS1 127 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 TGS1Q96RS0 853 aaKnown RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 ANAPC13Q9BS18 74 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 ZNF426Q9BUY5 554 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 TMED9Q9BVK6 235 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 ALX4Q9H161 411 aaPredicted RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 WDR55Q9H6Y2 383 aaPredicted RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 TMEM185BQ9H7F4 350 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 PLEKHA1Q9HB21 404 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 DDX18Q9NVP1 670 aaKnown RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 LYARQ9NX58 379 aaKnown RBP-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 GCNT4Q9P109 453 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 SLX4Q8IY92 1834 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 ATAD5Q96QE3 1844 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 ATRNO75882 1429 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 POLEQ07864 2286 aa-0.13□□□□□ -2.43
SNHG3-203ENST00000447507 APCP25054 2843 aa-0.14□□□□□ -2.43
SNHG3-203ENST00000447507 CACNA1BQ00975 2339 aa-0.14□□□□□ -2.43
SNHG3-203ENST00000447507 DIDO1Q9BTC0 2240 aaKnown RBP-0.14□□□□□ -2.43
SNHG3-203ENST00000447507 TMSB15BA0A087X1C1 80 aa-0.14□□□□□ -2.43
SNHG3-203ENST00000447507 IGHV1-45A0A0A0MS14 117 aa-0.14□□□□□ -2.43
SNHG3-203ENST00000447507 A0A1B0GXF2 115 aa-0.14□□□□□ -2.43
SNHG3-203ENST00000447507 RBFOX3A6NFN3 312 aa-0.14□□□□□ -2.43
SNHG3-203ENST00000447507 GOLGA8JA6NMD2 632 aa-0.14□□□□□ -2.43
SNHG3-203ENST00000447507 OR2AT4A6NND4 320 aa-0.14□□□□□ -2.43
SNHG3-203ENST00000447507 H3BN98 237 aa-0.14□□□□□ -2.43
SNHG3-203ENST00000447507 M0QXV9 152 aa-0.14□□□□□ -2.43
SNHG3-203ENST00000447507 DFFAO00273 331 aa-0.14□□□□□ -2.43
SNHG3-203ENST00000447507 XRCC2O43543 280 aa-0.14□□□□□ -2.43
SNHG3-203ENST00000447507 ALOX12BO75342 701 aa-0.14□□□□□ -2.43
SNHG3-203ENST00000447507 ZNF737O75373 536 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms