RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ZNF319Q9P2F9 582 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR5V1Q9UGF6 321 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 ING4Q9UNL4 249 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 SLC7A11Q9UPY5 501 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR2W1Q9Y3N9 320 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF407Q9C0G0 2248 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 TRAV18A0A075B6X5 111 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 LOC100509620A0A075B734 347 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 A0A0A6YYH2 397 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 TRGV8A0A0C4DH27 118 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF816-ZNF321PA0A0X1KG74 233 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 A0A1B0GVG6 124 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 FAM240BA0A1B0GVZ2 78 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 C5orf63A6NC05 138 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 A6NJ64 397 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 GABARAPH6UMI1 98 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 TSPAN4O14817 238 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 CTDSPLO15194 276 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 LYRM1O43325 122 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 SMPD2O60906 423 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 CTAG2O75638 210 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 CRTAPO75718 401 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 TNFSF13O75888 250 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 ECDO95905 644 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 CYB5AP00167 134 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 NRASP01111 189 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 HLA-DQB1P01920 261 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 CD3GP09693 182 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 GSTT2BP0CG30 244 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 SFTPCP11686 197 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 CDK2P24941 298 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR3A4PP47883 348 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 RBP2P50120 134 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 ATP1B3P54709 279 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 MTCP1P56278 107 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 AP3S2P59780 193 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 ACTBP60709 375 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 PPP1CBP62140 327 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 ACTG1P63261 375 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 FAM3AP98173 230 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 IFITM3Q01628 133 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF92Q03936 586 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 PRDX4Q13162 271 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 ASAH1Q13510 395 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 P2RY6Q15077 328 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR8B8Q15620 311 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 KISS1Q15726 138 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 GABRA6Q16445 453 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 C2orf76Q3KRA6 126 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 LINC00303Q3SY05 128 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 PRR30Q53SZ7 412 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 C1orf100Q5SVJ3 147 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 CLVS2Q5SYC1 327 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 RSBN1Q5VWQ0 802 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 RTL6Q6ICC9 239 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 ASPHD2Q6ICH7 369 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 RAB12Q6IQ22 244 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 PLET1Q6UQ28 207 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 GLIPR1L1Q6UWM5 242 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 Q6ZSR3 168 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 RFPL4BQ6ZWI9 263 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 ANGPTL5Q86XS5 388 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 CDH26Q8IXH8 852 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR5AS1Q8N127 324 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 GABRG1Q8N1C3 465 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 RPRMLQ8N4K4 120 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 ACBD4Q8NC06 268 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 CHST4Q8NCG5 386 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 STEAP2Q8NFT2 490 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR4D6Q8NGJ1 314 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR5D18Q8NGL1 313 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR1J1Q8NGS3 322 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR8S1Q8NH09 359 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 SMIM4Q8WVI0 70 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 SNRNP27Q8WVK2 155 aaKnown RBP3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 FCAMRQ8WWV6 532 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 ITFG2Q969R8 447 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 SGK3Q96BR1 496 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 SNRNP40Q96DI7 357 aaKnown RBP3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 MUCL1Q96DR8 90 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 POM121L2Q96KW2 1035 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 SDHCQ99643 169 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 SLX1AQ9BQ83 275 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 C7orf50Q9BRJ6 194 aaKnown RBP3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 C1QTNF5Q9BXJ0 243 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 TMEM59Q9BXS4 323 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 ABCG5Q9H222 651 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 DPAGT1Q9H3H5 408 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 PIGMQ9H3S5 423 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 IFT46Q9NQC8 304 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 FAIMQ9NVQ4 179 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 B3GNT2Q9NY97 397 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 MYEF2Q9P2K5 600 aaKnown RBP3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 GHRLQ9UBU3 117 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 RAB22AQ9UL26 194 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 TBC1D24Q9ULP9 559 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 FAM215AQ9Y5M1 114 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 CACNG2Q9Y698 323 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 WDFY4Q6ZS81 3184 aa3.2□□□□□ -1.9
HMGB3P20-201ENST00000417997 NCOA6Q14686 2063 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms