RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ZNRD1Q9P1U0 126 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 COL6A5A8TX70 2615 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 ATRQ13535 2644 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 A0A087X0M5 115 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 TRBV5-7A0A0A0MS05 114 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 A0A1B0GX30 115 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 MEIOCA2RUB1 952 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 CLPSL1A2RUU4 121 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 PTGES3LE9PB15 166 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 ORC5O43913 435 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 ARL6IP5O75915 188 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 CLIC3O95833 236 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 OR2H2O95918 312 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 IGHV1-8P0DP01 117 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 ZNF44P15621 663 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 CELP19835 753 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 BCL3P20749 454 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 CFPP27918 469 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 HTR1DP28221 377 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 CD34P28906 385 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 BRS3P32247 399 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 SAA4P35542 130 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 KIR2DS4P43632 304 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 NPBWR2P48146 333 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 POU3F4P49335 361 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 GTF2A1P52655 376 aaPredicted RBP5.22□□□□□ -1.57
USP54-202ENST00000413442 DLX6P56179 175 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 GMFBP60983 142 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 SLC35A2P78381 396 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 AWAT1Q58HT5 328 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 STEAP3Q658P3 488 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 GLT8D1Q68CQ7 371 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 ZNF626Q68DY1 528 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 CCDC144NLQ6NUI1 221 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 Q6P435 159 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 TRAT1Q6PIZ9 186 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 BRD3OSQ6XYD6 125 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 AHSA2Q719I0 299 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 PRSS48Q7RTY5 328 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 SATL1Q86VE3 508 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 C8orf31Q8N9H6 132 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 OR4D6Q8NGJ1 314 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 C22orf15Q8WYQ4 148 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 AKR1E2Q96JD6 320 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 PGLYRP3Q96LB9 341 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 ZNF488Q96MN9 340 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 CST11Q9H112 138 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 TMEM133Q9H2Q1 129 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 GHITMQ9H3K2 345 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 ZNF696Q9H7X3 374 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 ACOT13Q9NPJ3 140 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 C19orf12Q9NSK7 152 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 RBFOX1Q9NWB1 397 aaKnown RBP5.22□□□□□ -1.57
USP54-202ENST00000413442 FBLN5Q9UBX5 448 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 AASSQ9UDR5 926 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 VPREB3Q9UKI3 123 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 ST3GAL6Q9Y274 331 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 GSTK1Q9Y2Q3 226 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 SESN1Q9Y6P5 492 aa5.22□□□□□ -1.57
USP54-202ENST00000413442 ANK3Q12955 4377 aaKnown RBP5.22□□□□□ -1.57
USP54-202ENST00000413442 IGKV1-12A0A0C4DH73 117 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 A0A0U1RQK1 487 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 KBTBD11-OT1A0A1B0GTJ5 212 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 A0A1B0GW55 424 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 TMEM82A0PJX8 343 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 FAM181BA6NEQ2 426 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 LEUTXA8MZ59 168 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 MCRIP1C9JLW8 97 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 F8VVB4 439 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 F8VWA3 439 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 SLC33A1O00400 549 aaPredicted RBP5.21□□□□□ -1.58
USP54-202ENST00000413442 GABRPO00591 440 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 TOR1AO14656 332 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 TIMM23O14925 209 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 DENRO43583 198 aaKnown RBP5.21□□□□□ -1.58
USP54-202ENST00000413442 SPRY1O43609 319 aaPredicted RBP5.21□□□□□ -1.58
USP54-202ENST00000413442 RGS10O43665 173 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 XPNPEP2O43895 674 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 PSPNO60542 156 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 TMEM127O75204 238 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 CLPXO76031 633 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 IGKV1D-12P01611 117 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 LPLP06858 475 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 GNAO1P09471 354 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 DUX4L2P0CJ85 424 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 DUX4L3P0CJ86 424 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 DUX4L4P0CJ87 422 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 DUX4L5P0CJ88 424 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 DUX4L6P0CJ89 424 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 DUX4L7P0CJ90 424 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 CGB3P0DN86 165 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 CGB7P0DN87 165 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 SRMP19623 302 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 CRHBPP24387 322 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 VHLP40337 213 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 GLP1RP43220 463 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 RPS11P62280 158 aaKnown RBP eCLIP5.21□□□□□ -1.58
USP54-202ENST00000413442 MLLT11Q13015 90 aaPredicted RBP5.21□□□□□ -1.58
USP54-202ENST00000413442 IRF3Q14653 427 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 LRRC75BQ2VPJ9 315 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms