RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 NECAP2Q9NVZ3 263 aa20.82■□□□□ 0.92
CSNK1E-203ENST00000396832 SLC7A11Q9UPY5 501 aa20.82■□□□□ 0.92
CSNK1E-203ENST00000396832 DUX1O43812 170 aa20.82■□□□□ 0.92
CSNK1E-203ENST00000396832 RPL23AP62750 156 aaKnown RBP20.82■□□□□ 0.92
CSNK1E-203ENST00000396832 FOXO1Q12778 655 aa20.82■□□□□ 0.92
CSNK1E-203ENST00000396832 SNAI3Q3KNW1 292 aa20.82■□□□□ 0.92
CSNK1E-203ENST00000396832 D2HGDHQ8N465 521 aa20.82■□□□□ 0.92
CSNK1E-203ENST00000396832 A0A1W2PR77 199 aa20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 IGSF23A1L1A6 192 aa20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 NXPH3O95157 252 aa20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 CASP6P55212 293 aa20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 MEX3BQ6ZN04 569 aaKnown RBP20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 PLXDC1Q8IUK5 500 aa20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 OR4D5Q8NGN0 318 aa20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 TMEM171Q8WVE6 324 aa20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 ZNF837Q96EG3 531 aaPredicted RBP20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 POM121Q96HA1 1249 aa20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 GPHA2Q96T91 129 aa20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 DCAF16Q9NXF7 216 aa20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 JOSD1Q15040 202 aaPredicted RBP20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 SLC16A14Q7RTX9 510 aa20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 C5orf24Q7Z6I8 188 aa20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 ZNF664Q8N3J9 261 aa20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 CLDND2Q8NHS1 167 aa20.81■□□□□ 0.92
CSNK1E-203ENST00000396832 PHF1O43189 567 aaPredicted RBP20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 ZNHIT1O43257 154 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 GZMBP10144 247 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 FUT3P21217 361 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 FGF7P21781 194 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 SP5Q6BEB4 398 aaPredicted RBP20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 PITPNC1Q9UKF7 332 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 HSPA12AO43301 675 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 ONECUT2O95948 504 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 LTBRP36941 435 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 MTCP1P56278 107 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 RAB4BP61018 213 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 ZNF385AQ96PM9 386 aaKnown RBP20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 GEMIN2O14893 280 aaKnown RBP20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 CEACAM6P40199 344 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 HNRNPKP61978 463 aaKnown RBP eCLIP20.8■□□□□ 0.922e-8■□□□□ 10.4
CSNK1E-203ENST00000396832 SLC35G3Q8N808 338 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 HAS2Q92819 552 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 RCC1LQ96I51 464 aaKnown RBP20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 TMEM68Q96MH6 324 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 UCN2Q96RP3 112 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 PLEK2Q9NYT0 353 aa20.8■□□□□ 0.92
CSNK1E-203ENST00000396832 B4DEV8 164 aa20.79■□□□□ 0.92
CSNK1E-203ENST00000396832 PITX3O75364 302 aa20.79■□□□□ 0.92
CSNK1E-203ENST00000396832 MDKP21741 143 aaPredicted RBP20.79■□□□□ 0.92
CSNK1E-203ENST00000396832 PTGDSP41222 190 aa20.79■□□□□ 0.92
CSNK1E-203ENST00000396832 NFAM1Q8NET5 270 aaPredicted RBP20.79■□□□□ 0.92
CSNK1E-203ENST00000396832 MRGPRX4Q96LA9 322 aa20.79■□□□□ 0.92
CSNK1E-203ENST00000396832 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.79■□□□□ 0.92
CSNK1E-203ENST00000396832 CELA2AP08217 269 aa20.79■□□□□ 0.92
CSNK1E-203ENST00000396832 CD27P26842 260 aa20.79■□□□□ 0.92
CSNK1E-203ENST00000396832 CD200P41217 278 aa20.79■□□□□ 0.92
CSNK1E-203ENST00000396832 GUCA1AP43080 201 aaPredicted RBP20.79■□□□□ 0.92
CSNK1E-203ENST00000396832 PIGYQ3MUY2 71 aa20.79■□□□□ 0.92
CSNK1E-203ENST00000396832 NDUFAF3Q9BU61 184 aa20.79■□□□□ 0.92
CSNK1E-203ENST00000396832 AKIRIN1Q9H9L7 192 aaPredicted RBP20.79■□□□□ 0.92
CSNK1E-203ENST00000396832 DVL1O14640 695 aa20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 DHRS3O75911 302 aa20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 PATE4P0C8F1 98 aa20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 C17orf82Q86X59 251 aaPredicted RBP20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 CA5BP1Q8WTZ4 195 aa20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 NOL4LQ96MY1 436 aaPredicted RBP20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 MRPL37Q9BZE1 423 aaKnown RBP20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 ZNF407Q9C0G0 2248 aa20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 CLDN34H7C241 214 aa20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 IGLV3-19P01714 112 aa20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 ZNF133P52736 654 aaPredicted RBP20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 NUTF2P61970 127 aaKnown RBP20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 OR5C1Q8NGR4 320 aa20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 OR6X1Q8NH79 312 aa20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 RAB24Q969Q5 203 aa20.78■□□□□ 0.92
CSNK1E-203ENST00000396832 GDF9O60383 454 aa20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 CYTIPO60759 359 aa20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 GRB2P62993 217 aaKnown RBP20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 RUNX1Q01196 453 aa20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 TCEAL6Q6IPX3 200 aa20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 RBMXL1Q96E39 390 aaKnown RBP20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 Q96M66 194 aa20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 SYT3Q9BQG1 590 aa20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 GPR87Q9BY21 358 aa20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 C11orf1Q9H5F2 150 aa20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 NKX2-6A6NCS4 301 aa20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 TGOLN2O43493 480 aa20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 RBM14Q96PK6 669 aaKnown RBP20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 OR6C1Q96RD1 312 aa20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 PLEKHF2Q9H8W4 249 aa20.77■□□□□ 0.92
CSNK1E-203ENST00000396832 RND2P52198 227 aa20.76■□□□□ 0.91
CSNK1E-203ENST00000396832 RAB11AP62491 216 aa20.76■□□□□ 0.91
CSNK1E-203ENST00000396832 RSPO1Q2MKA7 263 aaPredicted RBP20.76■□□□□ 0.91
CSNK1E-203ENST00000396832 NKAIN1Q4KMZ8 207 aa20.76■□□□□ 0.91
CSNK1E-203ENST00000396832 TMEM183AQ8IXX5 376 aa20.76■□□□□ 0.91
CSNK1E-203ENST00000396832 OXGR1Q96P68 337 aa20.76■□□□□ 0.91
CSNK1E-203ENST00000396832 CALHM2Q9HA72 323 aa20.76■□□□□ 0.91
CSNK1E-203ENST00000396832 PROB1E7EW31 1015 aa20.76■□□□□ 0.91
CSNK1E-203ENST00000396832 M0R135 149 aa20.76■□□□□ 0.91
CSNK1E-203ENST00000396832 PIAS2O75928 621 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms