RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 HIST1H2BDP58876 126 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 HIST1H2BCP62807 126 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 TNFRSF9Q07011 255 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 ADIPOQQ15848 244 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 RAB11BQ15907 218 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 HIST2H2BEQ16778 126 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.65□□□□□ -1.67
VPS41-203ENST00000395969 HES3Q5TGS1 186 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 Q6ZRG5 221 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 DCXRQ7Z4W1 244 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 MDGA2Q7Z553 956 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 LINC00346Q8IVM7 164 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 ZNF295-AS1Q8N0V1 137 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 ADAD2Q8NCV1 583 aaKnown RBP4.65□□□□□ -1.67
VPS41-203ENST00000395969 HPSE2Q8WWQ2 592 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 HIST1H2BHQ93079 126 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 TMEM106AQ96A25 262 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 NOL4LQ96MY1 436 aaPredicted RBP4.65□□□□□ -1.67
VPS41-203ENST00000395969 HIST1H2BNQ99877 126 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 HIST1H2BMQ99879 126 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 GPR61Q9BZJ8 451 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 WNT5BQ9H1J7 359 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 CALHM2Q9HA72 323 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 ELOVL3Q9HB03 270 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 SPACA1Q9HBV2 294 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 CLCF1Q9UBD9 225 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 HSF4Q9ULV5 492 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 SLC5A6Q9Y289 635 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 RALGAPA1Q6GYQ0 2036 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 A0A1B0GW64 132 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 C5orf51A6NDU8 294 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 OR5H1A6NKK0 313 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 H3BML4 177 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 DHHO43323 396 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 OR2C1O95371 312 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 GPANK1O95872 356 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 CST4P01036 141 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 CRYABP02511 175 aaKnown RBP4.64□□□□□ -1.67
VPS41-203ENST00000395969 GAPDHP04406 335 aaKnown RBP4.64□□□□□ -1.67
VPS41-203ENST00000395969 SPARCP09486 303 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 FCGR2AP12318 317 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 TCN2P20062 427 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 PTGER4P35408 488 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 FAM3AP98173 230 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 GUK1Q16774 197 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 MEP1BQ16820 701 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 FAM69BQ5VUD6 431 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 RPL7L1Q6DKI1 246 aaKnown RBP4.64□□□□□ -1.67
VPS41-203ENST00000395969 C5orf24Q7Z6I8 188 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 LINC00596Q86U02 117 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 CD163Q86VB7 1156 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 C17orf78Q8N4C9 275 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 ZNF610Q8N9Z0 462 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 BHLHE23Q8NDY6 225 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 OR10AD1Q8NGE0 317 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 OR51A4Q8NGJ6 313 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 OR13D1Q8NGV5 346 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 OR10AC1Q8NH08 325 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 SPSB1Q96BD6 273 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 SLAMF6Q96DU3 332 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 GNRHR2Q96P88 292 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 SRXN1Q9BYN0 137 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 OR11A1Q9GZK7 315 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 RAB18Q9NP72 206 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 RAB22AQ9UL26 194 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 COA3Q9Y2R0 106 aaPredicted RBP4.64□□□□□ -1.67
VPS41-203ENST00000395969 KCNIP3Q9Y2W7 256 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 PHF3Q92576 2039 aaKnown RBP4.64□□□□□ -1.67
VPS41-203ENST00000395969 A0A087WWC5 75 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 TRBV6-6A0A0A6YYG2 114 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 CDC14CA4D256 554 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 UMAD1C9J7I0 102 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 ZNF587BE7ETH6 402 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 KLRC4-KLRK1H3BQV0 150 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 CHRM2P08172 466 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 OR8G3PP0DMU2 310 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 COX5AP20674 150 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 MDKP21741 143 aaPredicted RBP4.64□□□□□ -1.67
VPS41-203ENST00000395969 HTR2CP28335 458 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 OPRM1P35372 400 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 BIDP55957 195 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 ADAM8P78325 824 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 MFGE8Q08431 387 aaPredicted RBP4.64□□□□□ -1.67
VPS41-203ENST00000395969 EIF2B1Q14232 305 aaKnown RBP4.64□□□□□ -1.67
VPS41-203ENST00000395969 HNF4GQ14541 408 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 RNASE10Q5GAN6 216 aaKnown RBP4.64□□□□□ -1.67
VPS41-203ENST00000395969 Q5PR19 223 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 ZNF468Q5VIY5 522 aaPredicted RBP4.64□□□□□ -1.67
VPS41-203ENST00000395969 KCTD9Q7L273 389 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 GATSQ8NAP1 163 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 ACBD4Q8NC06 268 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 OR10J5Q8NHC4 309 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 R3HDM4Q96D70 268 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 RNF125Q96EQ8 232 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 C5orf34Q96MH7 638 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 ARV1Q9H2C2 271 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 SPEGQ15772 3267 aa4.64□□□□□ -1.67
VPS41-203ENST00000395969 C13orf42A0A1B0GVH6 325 aa4.63□□□□□ -1.67
VPS41-203ENST00000395969 TMEM235A6NFC5 223 aa4.63□□□□□ -1.67
VPS41-203ENST00000395969 WIPF3A6NGB9 483 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms