RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 HLA-DRB5Q30154 266 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 ZNF385CQ66K41 422 aaPredicted RBP17.4■□□□□ 0.38
SHANK1-203ENST00000391813 RGP1Q92546 391 aaPredicted RBP17.4■□□□□ 0.38
SHANK1-203ENST00000391813 MENTQ9BUN1 341 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 ATP6V0CP27449 155 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 MMP16P51512 607 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 ATG4DQ86TL0 474 aaPredicted RBP17.4■□□□□ 0.38
SHANK1-203ENST00000391813 PPP1R14DQ9NXH3 145 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 NKX6-3A6NJ46 265 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 IGHV3-9P01782 118 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 H2BFSP57053 126 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 NHLH2Q02577 135 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 OR5AS1Q8N127 324 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 PGLYRP3Q96LB9 341 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 AQP10Q96PS8 301 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 CYB5R3P00387 301 aaPredicted RBP17.39■□□□□ 0.37
SHANK1-203ENST00000391813 PAFAH1B2P68402 229 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 TSEN54Q7Z6J9 526 aaKnown RBP17.39■□□□□ 0.37
SHANK1-203ENST00000391813 COX14Q96I36 57 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 SLC26A1Q9H2B4 701 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 SLC2A9Q9NRM0 540 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 OCIAD1Q9NX40 245 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 ANKRD10Q9NXR5 420 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 PRR13Q9NZ81 148 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 RECKO95980 971 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 BTNL3Q6UXE8 466 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 SLC25A38Q96DW6 304 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 A0A1B0GTQ1 180 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 M0R1X1 148 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 CHST1O43916 411 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 ZNF816Q0VGE8 651 aaPredicted RBP17.39■□□□□ 0.37
SHANK1-203ENST00000391813 DUSP13Q9UII6 198 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 TRIP11Q15643 1979 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 NPIPB9F8W1W9 429 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 HSPB1P04792 205 aaKnown RBP17.39■□□□□ 0.37
SHANK1-203ENST00000391813 B4GALT1P15291 398 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 HOGA1Q86XE5 327 aa17.39■□□□□ 0.37
SHANK1-203ENST00000391813 PGA4P0DJD7 388 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 PGA5P0DJD9 388 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 GNG3P63215 75 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 REC114Q7Z4M0 266 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 HIST1H2BAQ96A08 127 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 SIGLEC5O15389 551 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 COX7A2P2O60397 106 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 CD99P14209 185 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 NANOS3P60323 173 aaKnown RBP17.38■□□□□ 0.37
SHANK1-203ENST00000391813 SPRED2Q7Z698 418 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 EIF4E3Q8N5X7 224 aaKnown RBP17.38■□□□□ 0.37
SHANK1-203ENST00000391813 OR10V1Q8NGI7 309 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 LRRC3BQ96PB8 259 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 WDR13Q9H1Z4 485 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 CARHSP1Q9Y2V2 147 aaKnown RBP17.38■□□□□ 0.37
SHANK1-203ENST00000391813 STARD10Q9Y365 291 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 C11orf94C9JXX5 98 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 NTN1O95631 604 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 OR8B8Q15620 311 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 IGFBP7Q16270 282 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 YRDCQ86U90 279 aaKnown RBP17.38■□□□□ 0.37
SHANK1-203ENST00000391813 ADAMTS17Q8TE56 1095 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 TBX15Q96SF7 602 aa17.38■□□□□ 0.37
SHANK1-203ENST00000391813 TMEM30CPA0ZSE6 113 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 NRG2O14511 850 aaPredicted RBP17.37■□□□□ 0.37
SHANK1-203ENST00000391813 TRGC2P03986 189 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 RCC1P18754 421 aaPredicted RBP17.37■□□□□ 0.37
SHANK1-203ENST00000391813 FSTP19883 344 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 HOXA6P31267 233 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 DEFB109BQ30KR1 87 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 C17orf78Q8N4C9 275 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 DOK5Q9P104 306 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 FOXB1Q99853 325 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 KCNE5Q9UJ90 142 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 CXCL13O43927 109 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 ZNF880Q6PDB4 577 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 CBLN3Q6UW01 205 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 KLK13Q9UKR3 277 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 TRBV5-5A0A0J9YX44 114 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 KLK10O43240 276 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 PDE6DO43924 150 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 LPAR6P43657 344 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 ARL16Q0P5N6 197 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 EIF4EBP2Q13542 120 aaPredicted RBP17.37■□□□□ 0.37
SHANK1-203ENST00000391813 ACY3Q96HD9 319 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 DYNLRB1Q9NP97 96 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 PAM16Q9Y3D7 125 aa17.37■□□□□ 0.37
SHANK1-203ENST00000391813 TCF21O43680 179 aa17.36■□□□□ 0.37
SHANK1-203ENST00000391813 SEMA7AO75326 666 aa17.36■□□□□ 0.37
SHANK1-203ENST00000391813 ESRP2Q9H6T0 727 aaKnown RBP17.36■□□□□ 0.37
SHANK1-203ENST00000391813 GYPAP02724 150 aa17.36■□□□□ 0.37
SHANK1-203ENST00000391813 TBC1D26Q86UD7 250 aa17.36■□□□□ 0.37
SHANK1-203ENST00000391813 PITX3O75364 302 aa17.36■□□□□ 0.37
SHANK1-203ENST00000391813 CT62P0C5K7 136 aa17.36■□□□□ 0.37
SHANK1-203ENST00000391813 BCL2P10415 239 aa17.36■□□□□ 0.37
SHANK1-203ENST00000391813 MDH2P40926 338 aaKnown RBP17.36■□□□□ 0.37
SHANK1-203ENST00000391813 CYB561D1Q8N8Q1 229 aa17.36■□□□□ 0.37
SHANK1-203ENST00000391813 OR8B12Q8NGG6 310 aa17.36■□□□□ 0.37
SHANK1-203ENST00000391813 POM121L2Q96KW2 1035 aa17.36■□□□□ 0.37
SHANK1-203ENST00000391813 C1QCP02747 245 aa17.36■□□□□ 0.37
SHANK1-203ENST00000391813 SERF2P84101 59 aa17.36■□□□□ 0.37
SHANK1-203ENST00000391813 PSG6Q00889 435 aa17.36■□□□□ 0.37
SHANK1-203ENST00000391813 CEACAM16Q2WEN9 425 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms