RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 CHST4Q8NCG5 386 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 ZNF48Q96MX3 618 aaPredicted RBP17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 UQCC2Q9BRT2 126 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 METTL8Q9H825 291 aaKnown RBP17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 UNKLQ9H9P5 680 aaKnown RBP17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 ST3GAL6Q9Y274 331 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 A0A0A6YYJ9 748 aa17.2■□□□□ 0.34
MAP1LC3A-202ENST00000374837 A0A1W2PP11 408 aa17.2■□□□□ 0.34
MAP1LC3A-202ENST00000374837 A0A1W2PPH5 198 aa17.2■□□□□ 0.34
MAP1LC3A-202ENST00000374837 MEX3AA1L020 520 aaKnown RBP17.2■□□□□ 0.34
MAP1LC3A-202ENST00000374837 ERP29P30040 261 aaKnown RBP17.2■□□□□ 0.34
MAP1LC3A-202ENST00000374837 DLX6P56179 175 aa17.2■□□□□ 0.34
MAP1LC3A-202ENST00000374837 MEF2CQ06413 473 aaPredicted RBP17.2■□□□□ 0.34
MAP1LC3A-202ENST00000374837 GLT8D1Q68CQ7 371 aa17.2■□□□□ 0.34
MAP1LC3A-202ENST00000374837 AWAT2Q6E213 333 aa17.2■□□□□ 0.34
MAP1LC3A-202ENST00000374837 METAP1DQ6UB28 335 aaPredicted RBP17.2■□□□□ 0.34
MAP1LC3A-202ENST00000374837 SIGLECL1Q8N7X8 197 aa17.2■□□□□ 0.34
MAP1LC3A-202ENST00000374837 C1orf147Q96MC9 270 aaPredicted RBP17.2■□□□□ 0.34
MAP1LC3A-202ENST00000374837 PPA2Q9H2U2 334 aa17.2■□□□□ 0.34
MAP1LC3A-202ENST00000374837 PCDHB16Q9NRJ7 776 aa17.2■□□□□ 0.34
MAP1LC3A-202ENST00000374837 TRAV24A0A0B4J272 114 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 RNASEK-C17orf49H0YIS7 233 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 CD37P11049 281 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 GTF2F2P13984 249 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 PSMB9P28065 219 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 RBM11P57052 281 aaKnown RBP17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 HILS1P60008 231 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 ERVFRD-1P60508 538 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 KLRD1Q13241 179 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 GPR176Q14439 515 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 NHLRC3Q5JS37 347 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 TCF23Q7RTU1 214 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 FCGR1BQ92637 280 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 FOXRED1Q96CU9 486 aaPredicted RBP17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 SLITRK2Q9H156 845 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 NDUFB11Q9NX14 153 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 ZNF581Q9P0T4 197 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 CUBNO60494 3623 aa17.19■□□□□ 0.34
MAP1LC3A-202ENST00000374837 hADV38S2A0JD32 116 aa17.18■□□□□ 0.34
MAP1LC3A-202ENST00000374837 ARL6IP5O75915 188 aa17.18■□□□□ 0.34
MAP1LC3A-202ENST00000374837 ZNF728P0DKX0 622 aa17.18■□□□□ 0.34
MAP1LC3A-202ENST00000374837 P2RX3P56373 397 aa17.18■□□□□ 0.34
MAP1LC3A-202ENST00000374837 AESQ08117 197 aa17.18■□□□□ 0.34
MAP1LC3A-202ENST00000374837 C1orf100Q5SVJ3 147 aa17.18■□□□□ 0.34
MAP1LC3A-202ENST00000374837 C17orf98A8MV24 154 aa17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 CCRL2O00421 344 aa17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 GEMIN2O14893 280 aaKnown RBP17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 CSN2P05814 226 aa17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 CALRP27797 417 aaKnown RBP17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 GLIPR1P48060 266 aa17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 DEFB112Q30KQ8 113 aa17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 PAN3Q58A45 887 aaKnown RBP17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 NCR3LG1Q68D85 454 aa17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 HCP5Q6MZN7 132 aa17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 CD200R1LQ6Q8B3 271 aa17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 PIP4P2Q8N4L2 257 aa17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 COQ2Q96H96 371 aa17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 GFI1Q99684 422 aa17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 ING3Q9NXR8 418 aa17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 AK6Q9Y3D8 172 aaKnown RBP17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 LINC00312Q9Y6C7 94 aa17.17■□□□□ 0.34
MAP1LC3A-202ENST00000374837 MDFIC2A0A1B0GVS7 189 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 TRDV1A0A1B0GX56 115 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 hCG_1809904A0A1W2PP81 198 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 A0A1W2PPE2 198 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 A0A1W2PR64 198 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 A0A1W2PRD5 423 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 A0A1W2PRF3 423 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 A0A1W2PRM7 423 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 A0A1W2PRV1 198 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 FUOMA2VDF0 154 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 HSPB6O14558 160 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 OR7C1O76099 320 aaPredicted RBP17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 GUCA2AQ02747 115 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 TAF9Q16594 264 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 KRTAP24-1Q3LI83 254 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 RBMS3Q6XE24 437 aaKnown RBP17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 ZDHHC22Q8N966 263 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 TMEM104Q8NE00 496 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 MRPS24Q96EL2 167 aaKnown RBP17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 JMJD8Q96S16 334 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 BANF2Q9H503 90 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 IFT22Q9H7X7 185 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 ESM1Q9NQ30 184 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 GHRLQ9UBU3 117 aa17.16■□□□□ 0.34
MAP1LC3A-202ENST00000374837 UBE2E1P51965 193 aa17.15■□□□□ 0.34
MAP1LC3A-202ENST00000374837 ATXN7L3Q14CW9 347 aaPredicted RBP17.15■□□□□ 0.34
MAP1LC3A-202ENST00000374837 MPV17LQ2QL34 196 aa17.15■□□□□ 0.34
MAP1LC3A-202ENST00000374837 KRBOX4Q5JUW0 171 aa17.15■□□□□ 0.34
MAP1LC3A-202ENST00000374837 LINC00596Q86U02 117 aa17.15■□□□□ 0.34
MAP1LC3A-202ENST00000374837 PNKDQ8N490 385 aa17.15■□□□□ 0.34
MAP1LC3A-202ENST00000374837 SUMF2Q8NBJ7 301 aa17.15■□□□□ 0.34
MAP1LC3A-202ENST00000374837 TMEM158Q8WZ71 300 aa17.15■□□□□ 0.34
MAP1LC3A-202ENST00000374837 ZNF714Q96N38 554 aa17.15■□□□□ 0.34
MAP1LC3A-202ENST00000374837 PRDM13Q9H4Q3 707 aa17.15■□□□□ 0.34
MAP1LC3A-202ENST00000374837 HEXA-AS1Q9H8Q6 139 aa17.15■□□□□ 0.34
MAP1LC3A-202ENST00000374837 ODAMA1E959 279 aa17.14■□□□□ 0.33
MAP1LC3A-202ENST00000374837 NPFFO15130 113 aa17.14■□□□□ 0.33
MAP1LC3A-202ENST00000374837 SLC22A1O15245 554 aa17.14■□□□□ 0.33
MAP1LC3A-202ENST00000374837 CRTAPO75718 401 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms