RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 FBXO17Q96EF6 278 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 NEIL1Q96FI4 390 aaPredicted RBP10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 ADTRPQ96IZ2 230 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 MAP1LC3B2A6NCE7 125 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 LEUTXA8MZ59 168 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 G3V3Q6 166 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 CD82P27701 267 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 KIR2DS2P43631 304 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 PRSS12P56730 875 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 UBE2G2P60604 165 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 Q3ZCU0 254 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 TMEM65Q6PI78 240 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 TBC1D26Q86UD7 250 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 DNASE2BQ8WZ79 361 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 TMEM18Q96B42 140 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 MAP1LC3BQ9GZQ8 125 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 SYNGR2O43760 224 aa10.4□□□□□ -0.75
DEPDC1-201ENST00000370966 YIF1AO95070 293 aa10.4□□□□□ -0.75
DEPDC1-201ENST00000370966 FBP1P09467 338 aa10.4□□□□□ -0.75
DEPDC1-201ENST00000370966 GNB1P62873 340 aa10.4□□□□□ -0.75
DEPDC1-201ENST00000370966 MGAT2Q10469 447 aa10.4□□□□□ -0.75
DEPDC1-201ENST00000370966 LYG1Q8N1E2 194 aa10.4□□□□□ -0.75
DEPDC1-201ENST00000370966 SLC25A45Q8N413 288 aa10.4□□□□□ -0.75
DEPDC1-201ENST00000370966 NECAP1Q8NC96 275 aa10.4□□□□□ -0.75
DEPDC1-201ENST00000370966 OR2M7Q8NG81 312 aa10.4□□□□□ -0.75
DEPDC1-201ENST00000370966 ANGPTL4Q9BY76 406 aa10.4□□□□□ -0.75
DEPDC1-201ENST00000370966 CTDSP1Q9GZU7 261 aa10.4□□□□□ -0.75
DEPDC1-201ENST00000370966 OR2D2Q9H210 308 aa10.4□□□□□ -0.75
DEPDC1-201ENST00000370966 hADV38S2A0JD32 116 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 TMEM218A2RU14 115 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 SPP1P10451 314 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 FGF5P12034 268 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 AKR1C3P42330 323 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 ASCL1P50553 236 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 SOX8P57073 446 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 TPPP3Q9BW30 176 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 AMDHD2Q9Y303 409 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 M0R296 226 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 COX7A2P2O60397 106 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 CRYBA2P53672 197 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 ETV3LQ6ZN32 361 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 FKBP11Q9NYL4 201 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 RNF24Q9Y225 148 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 TRBV5-7A0A0A0MS05 114 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 PATE3B3GLJ2 98 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 MBPP02686 304 aaPredicted RBP10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 FGF2P09038 288 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 GZMHP20718 246 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 ALKBH6Q3KRA9 238 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 FFAR4Q5NUL3 377 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 GAR1Q9NY12 217 aaKnown RBP10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 ELF5Q9UKW6 265 aaPredicted RBP10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 V9GYS6 101 aa10.39□□□□□ -0.75
DEPDC1-201ENST00000370966 BMP5P22003 454 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 TNFAIP6P98066 277 aaPredicted RBP10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 TMEM267Q0VDI3 215 aaPredicted RBP10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 FBXW9Q5XUX1 488 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 LINC00596Q86U02 117 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 PLPPR2Q96GM1 343 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 AMELYQ99218 206 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 TMEM147Q9BVK8 224 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 GAL3ST2Q9H3Q3 398 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 HES4Q9HCC6 221 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 LPAR3Q9UBY5 353 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 CACNA1EQ15878 2313 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 ZNF320A2RRD8 509 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 NPIPB13A6NJU9 1138 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 NPIPB4C9JG80 1138 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 CNN1P51911 297 aaKnown RBP10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 FABP9Q0Z7S8 132 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 PDZD11Q5EBL8 140 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 MRGPRDQ8TDS7 321 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 FAM96BQ9Y3D0 163 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 TDRD6O60522 2096 aaKnown RBP10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 KLF4O43474 513 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 SOX15O60248 233 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 STARD6P59095 220 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 LINC01590Q5TEZ4 76 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 TSPO2Q5TGU0 170 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 STUMQ69YW2 141 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 FDX2Q6P4F2 183 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 INO80CQ6PI98 192 aaPredicted RBP10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 CRIPAKQ8N1N5 446 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 ZBTB34Q8NCN2 500 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 MRPL24Q96A35 216 aaKnown RBP10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 SLC25A38Q96DW6 304 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 ZNF251Q9BRH9 671 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 RALGAPA2Q2PPJ7 1873 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 DUXBA0A1W2PPF3 345 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 CNOT1A5YKK6 2376 aaKnown RBP10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 OOEPA6NGQ2 149 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 LOC285556D6RIA3 1793 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 TMEM241Q24JQ0 296 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 ZNF528Q3MIS6 628 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 SLC25A47Q6Q0C1 308 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 SLC35D1Q9NTN3 355 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 ZNF586Q9NXT0 402 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 ZMIZ1Q9ULJ6 1067 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 TNFSF18Q9UNG2 199 aa10.38□□□□□ -0.75
DEPDC1-201ENST00000370966 KCNK7Q9Y2U2 307 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms