RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 POM121L2Q96KW2 1035 aa14.02□□□□□ -0.16
COL17A1-202ENST00000369733 SMDT1Q9H4I9 107 aa14.02□□□□□ -0.16
COL17A1-202ENST00000369733 LHX9Q9NQ69 397 aa14.02□□□□□ -0.16
COL17A1-202ENST00000369733 HRASP01112 189 aa14.02□□□□□ -0.16
COL17A1-202ENST00000369733 RPLP1P05386 114 aaKnown RBP14.02□□□□□ -0.16
COL17A1-202ENST00000369733 VAX1Q5SQQ9 334 aa14.02□□□□□ -0.16
COL17A1-202ENST00000369733 WDR73Q6P4I2 378 aa14.02□□□□□ -0.16
COL17A1-202ENST00000369733 MRGPRGQ86SM5 289 aa14.02□□□□□ -0.16
COL17A1-202ENST00000369733 MENTQ9BUN1 341 aa14.02□□□□□ -0.16
COL17A1-202ENST00000369733 NHLH2Q02577 135 aa14.02□□□□□ -0.17
COL17A1-202ENST00000369733 OR2D2Q9H210 308 aa14.02□□□□□ -0.17
COL17A1-202ENST00000369733 OCIAD1Q9NX40 245 aa14.02□□□□□ -0.17
COL17A1-202ENST00000369733 IGKV1-8A0A0C4DH67 115 aa14.02□□□□□ -0.17
COL17A1-202ENST00000369733 FCGR3BO75015 233 aa14.02□□□□□ -0.17
COL17A1-202ENST00000369733 CA6P23280 308 aa14.02□□□□□ -0.17
COL17A1-202ENST00000369733 ZXDCQ2QGD7 858 aaPredicted RBP14.02□□□□□ -0.17
COL17A1-202ENST00000369733 C10orf35Q96D05 121 aa14.02□□□□□ -0.17
COL17A1-202ENST00000369733 LRFN3Q9BTN0 628 aa14.02□□□□□ -0.17
COL17A1-202ENST00000369733 RCC2Q9P258 522 aaKnown RBP14.02□□□□□ -0.17
COL17A1-202ENST00000369733 COL9A1P20849 921 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 OR13G1Q8NGZ3 307 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 GINS3Q9BRX5 216 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 KLF13Q9Y2Y9 288 aaPredicted RBP14.01□□□□□ -0.17
COL17A1-202ENST00000369733 DEDDO75618 318 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 LSM6P62312 80 aaKnown RBP14.01□□□□□ -0.17
COL17A1-202ENST00000369733 IGFBP7Q16270 282 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 ZNF260Q3ZCT1 412 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 ETV3LQ6ZN32 361 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 CYB561D1Q8N8Q1 229 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 SLC45A2Q9UMX9 530 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 KHDC3LQ587J8 217 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 CXorf67Q86X51 503 aaPredicted RBP14.01□□□□□ -0.17
COL17A1-202ENST00000369733 ANGPTL4Q9BY76 406 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 CCL28Q9NRJ3 127 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 DEFB108AA8MXU0 73 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 PITX3O75364 302 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 ASAH2BP0C7U1 165 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 GALNSP34059 522 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 CCL11P51671 97 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 RHOBP62745 196 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 ZNF718Q3SXZ3 478 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 UNQ9370/PRO34162Q6UXP9 181 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 HDHD3Q9BSH5 251 aaPredicted RBP14.01□□□□□ -0.17
COL17A1-202ENST00000369733 NGBQ9NPG2 151 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 UPK3AO75631 287 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 TTRP02766 147 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 HES1Q14469 280 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 ACSM6Q6P461 480 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 DPPA3Q6W0C5 159 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 VASH2Q86V25 355 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 OR10G8Q8NGN5 311 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 PSG11Q9UQ72 335 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 MYO7AQ13402 2215 aa14.01□□□□□ -0.17
COL17A1-202ENST00000369733 KIAA1456Q9P272 454 aa14□□□□□ -0.17
COL17A1-202ENST00000369733 IL17BQ9UHF5 180 aa14□□□□□ -0.17
COL17A1-202ENST00000369733 ARL16Q0P5N6 197 aa14□□□□□ -0.17
COL17A1-202ENST00000369733 DYRK2Q92630 601 aa14□□□□□ -0.17
COL17A1-202ENST00000369733 UBE2ZQ9H832 354 aaPredicted RBP14□□□□□ -0.17
COL17A1-202ENST00000369733 TRBV5-7A0A0A0MS05 114 aa14□□□□□ -0.17
COL17A1-202ENST00000369733 TMEM50BP56557 158 aa14□□□□□ -0.17
COL17A1-202ENST00000369733 CCL7P80098 99 aa14□□□□□ -0.17
COL17A1-202ENST00000369733 ADAMTS17Q8TE56 1095 aa14□□□□□ -0.17
COL17A1-202ENST00000369733 PTPMT1Q8WUK0 201 aaPredicted RBP14□□□□□ -0.17
COL17A1-202ENST00000369733 GPR132Q9UNW8 380 aa14□□□□□ -0.17
COL17A1-202ENST00000369733 RPS23P62266 143 aaKnown RBP14□□□□□ -0.17
COL17A1-202ENST00000369733 LBHQ53QV2 105 aaPredicted RBP14□□□□□ -0.17
COL17A1-202ENST00000369733 FA2HQ7L5A8 372 aa14□□□□□ -0.17
COL17A1-202ENST00000369733 AMELYQ99218 206 aa14□□□□□ -0.17
COL17A1-202ENST00000369733 QSER1Q2KHR3 1735 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 TRGC2P03986 189 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 PAX5Q02548 391 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 Q6ZS52 159 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 HLA-CQ95604 372 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 HKR1P10072 659 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 MDKP21741 143 aaPredicted RBP13.99□□□□□ -0.17
COL17A1-202ENST00000369733 CRYBA2P53672 197 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 FOXO1Q12778 655 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 PIGYQ3MUY2 71 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 STUMQ69YW2 141 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 OR10C1Q96KK4 312 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 SLC22A20A6NK97 555 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 CCL2P13500 99 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.99□□□□□ -0.17
COL17A1-202ENST00000369733 RFESDQ8TAC1 157 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.99□□□□□ -0.17
COL17A1-202ENST00000369733 SEMA7AO75326 666 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 C1QL1O75973 258 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 C16orf82Q7Z2V1 217 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 OR5AU1Q8NGC0 362 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 AQP10Q96PS8 301 aa13.99□□□□□ -0.17
COL17A1-202ENST00000369733 RPP25Q9BUL9 199 aaKnown RBP13.99□□□□□ -0.17
COL17A1-202ENST00000369733 TRBV23-1A0A0A0MS06 115 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 ERGP11308 486 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 HLA-DRB5Q30154 266 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 TMEM211Q6ICI0 200 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 LRP11Q86VZ4 500 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 RHOVQ96L33 236 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 EGLN1Q9GZT9 426 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 CHST5Q9GZS9 411 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 IGHV1OR21-1A0A087WYE8 117 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms