RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 CALHM1Q8IU99 346 aa15.24■□□□□ 0.03
GYPC-202ENST00000356887 OR4D5Q8NGN0 318 aa15.24■□□□□ 0.03
GYPC-202ENST00000356887 C1QTNF5Q9BXJ0 243 aa15.24■□□□□ 0.03
GYPC-202ENST00000356887 RCL1Q9Y2P8 373 aaKnown RBP15.24■□□□□ 0.03
GYPC-202ENST00000356887 TMED3Q9Y3Q3 217 aa15.24■□□□□ 0.03
GYPC-202ENST00000356887 CYTIPO60759 359 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 TRAPPC6AO75865 159 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 FOLR2P14207 255 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 PAX6P26367 422 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 RAB4BP61018 213 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 Q8NFD4 153 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 NANPQ8TBE9 248 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 TP53RKQ96S44 253 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 ZNF442Q9H7R0 627 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 RNF122Q9H9V4 155 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 P4HTMQ9NXG6 502 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 LUZP4Q9P127 313 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 MRPS18CQ9Y3D5 142 aaKnown RBP15.23■□□□□ 0.03
GYPC-202ENST00000356887 WDFY4Q6ZS81 3184 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 NME2P1O60361 137 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 LMO1P25800 156 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 NPBWR2P48146 333 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 PPT1P50897 306 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 RPS18P62269 152 aaKnown RBP15.23■□□□□ 0.03
GYPC-202ENST00000356887 NHLH2Q02577 135 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 ZNF611Q8N823 705 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 CPEB3Q8NE35 698 aaKnown RBP15.23■□□□□ 0.03
GYPC-202ENST00000356887 EGLN1Q9GZT9 426 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 PRDM14Q9GZV8 571 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 DEPPQ9NTK1 212 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 CBY1Q9Y3M2 126 aa15.23■□□□□ 0.03
GYPC-202ENST00000356887 PATE3B3GLJ2 98 aa15.22■□□□□ 0.03
GYPC-202ENST00000356887 MPPED1O15442 326 aa15.22■□□□□ 0.03
GYPC-202ENST00000356887 PPYP01298 95 aa15.22■□□□□ 0.03
GYPC-202ENST00000356887 OTX2P32243 289 aa15.22■□□□□ 0.03
GYPC-202ENST00000356887 EIF2S3P41091 472 aaKnown RBP15.22■□□□□ 0.03
GYPC-202ENST00000356887 GUK1Q16774 197 aa15.22■□□□□ 0.03
GYPC-202ENST00000356887 ETV3LQ6ZN32 361 aa15.22■□□□□ 0.03
GYPC-202ENST00000356887 SLC25A26Q70HW3 274 aa15.22■□□□□ 0.03
GYPC-202ENST00000356887 SLC35G3Q8N808 338 aa15.22■□□□□ 0.03
GYPC-202ENST00000356887 C11orf1Q9H5F2 150 aa15.22■□□□□ 0.03
GYPC-202ENST00000356887 C19orf12Q9NSK7 152 aa15.22■□□□□ 0.03
GYPC-202ENST00000356887 DMDP11532 3685 aa15.22■□□□□ 0.03
GYPC-202ENST00000356887 SHANK1Q9Y566 2161 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 RPL36A-HNRNPH2H7BZ11 118 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 ACAA1P09110 424 aaPredicted RBP15.21■□□□□ 0.03
GYPC-202ENST00000356887 CAMLGP49069 296 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 RAB5CP51148 216 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 NOVA1P51513 510 aaKnown RBP15.21■□□□□ 0.03
GYPC-202ENST00000356887 COLCA1Q6ZS62 124 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 C15orf54Q8N8G6 183 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 KDF1Q8NAX2 398 aaPredicted RBP15.21■□□□□ 0.03
GYPC-202ENST00000356887 ABHD3Q8WU67 409 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 ZNF845Q96IR2 970 aaPredicted RBP15.21■□□□□ 0.03
GYPC-202ENST00000356887 PARPBPQ9NWS1 579 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 STRAPQ9Y3F4 350 aaKnown RBP15.21■□□□□ 0.03
GYPC-202ENST00000356887 CNTRLQ7Z7A1 2325 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 KMT2EQ8IZD2 1858 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 C3orf85A0A1B0GTC6 90 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 TRDCB7Z8K6 153 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 OR7C1O76099 320 aaPredicted RBP15.21■□□□□ 0.03
GYPC-202ENST00000356887 SP9P0CG40 484 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 KCNJ3P48549 501 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 FHITP49789 147 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 ZNF616Q08AN1 781 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 Q6ZS49 121 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 FAM185AQ8N0U4 392 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 TMEM45BQ96B21 275 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 CLCC1Q96S66 551 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 SH3BGRL3Q9H299 93 aa15.21■□□□□ 0.03
GYPC-202ENST00000356887 PINLYPA6NC86 204 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 FAM90A10PA6NDY2 464 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 FAM90A18PA6NE21 464 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 FAM90A16PA6NEW6 464 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 FAM90A20PA6NIJ5 464 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 FAM90A8PA6NJQ4 464 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 FAM90A7PA6NKC0 464 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 FAM90A22PA8MWA6 464 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 FAM90A12PA8MX19 464 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 FAM90A5PA8MXJ8 464 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 FAM90A23PA8MXZ1 464 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 EIF3GO75821 320 aaKnown RBP eCLIP15.2■□□□□ 0.02
GYPC-202ENST00000356887 FAM90A15PP0C7V4 464 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 FAM90A13PP0C7W8 464 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 FAM90A14PP0C7W9 464 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 FAM90A24PP0C7X0 464 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 GNRHRP30968 328 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 GFRA1P56159 465 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 ACER2Q5QJU3 275 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 PEAR1Q5VY43 1037 aaPredicted RBP15.2■□□□□ 0.02
GYPC-202ENST00000356887 MEX3BQ6ZN04 569 aaKnown RBP15.2■□□□□ 0.02
GYPC-202ENST00000356887 ZFP82Q8N141 532 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 C2CD4CQ8TF44 421 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 CPNE4Q96A23 557 aaPredicted RBP15.2■□□□□ 0.02
GYPC-202ENST00000356887 TMEM222Q9H0R3 208 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 TCFL5Q9UL49 500 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 NKX2-6A6NCS4 301 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 CDS2O95674 445 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 GDF1P27539 372 aa15.2■□□□□ 0.02
GYPC-202ENST00000356887 SRPXP78539 464 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms