RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SSX4O60224 188 aa22.59■■□□□ 1.21
SSBP4-202ENST00000348495 GABRA2P47869 451 aa22.59■■□□□ 1.21
SSBP4-202ENST00000348495 PPP5CP53041 499 aa22.59■■□□□ 1.21
SSBP4-202ENST00000348495 PNLIPRP3Q17RR3 467 aa22.59■■□□□ 1.21
SSBP4-202ENST00000348495 TIMD4Q96H15 378 aa22.59■■□□□ 1.21
SSBP4-202ENST00000348495 GAFA1Q96PS6 74 aa22.59■■□□□ 1.21
SSBP4-202ENST00000348495 PPIHO43447 177 aaKnown RBP22.58■■□□□ 1.21
SSBP4-202ENST00000348495 CA11O75493 328 aa22.58■■□□□ 1.21
SSBP4-202ENST00000348495 GIFP27352 417 aa22.58■■□□□ 1.21
SSBP4-202ENST00000348495 CD40LGP29965 261 aa22.58■■□□□ 1.21
SSBP4-202ENST00000348495 KCNJ8Q15842 424 aa22.58■■□□□ 1.21
SSBP4-202ENST00000348495 PYDC2Q56P42 97 aa22.58■■□□□ 1.21
SSBP4-202ENST00000348495 BPIFB2Q8N4F0 458 aa22.58■■□□□ 1.21
SSBP4-202ENST00000348495 ZNF561Q8N587 486 aa22.58■■□□□ 1.21
SSBP4-202ENST00000348495 RAB1CQ92928 201 aa22.58■■□□□ 1.21
SSBP4-202ENST00000348495 CCL13Q99616 98 aa22.58■■□□□ 1.21
SSBP4-202ENST00000348495 SHARPINQ9H0F6 387 aa22.58■■□□□ 1.21
SSBP4-202ENST00000348495 ZNF665Q9H7R5 613 aa22.58■■□□□ 1.21
SSBP4-202ENST00000348495 MEIOCA2RUB1 952 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 MCRIP1C9JLW8 97 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 HSPB6O14558 160 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 PAN3Q58A45 887 aaKnown RBP22.57■■□□□ 1.2
SSBP4-202ENST00000348495 AVPI1Q5T686 147 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 SHEQ5VZ18 495 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 GDPD1Q8N9F7 314 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 BEX4Q9NWD9 120 aaPredicted RBP22.57■■□□□ 1.2
SSBP4-202ENST00000348495 KAAG1Q9UBP8 84 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 AK3Q9UIJ7 227 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 ARID1AO14497 2285 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 UBE2QL1A1L167 161 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 SIGLEC5O15389 551 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 NDUFA2O43678 99 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 PRSS3P35030 304 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 OR3A1P47881 315 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 MRPS10P82664 201 aaKnown RBP22.57■■□□□ 1.2
SSBP4-202ENST00000348495 RBM39Q14498 530 aaKnown RBP22.57■■□□□ 1.2
SSBP4-202ENST00000348495 DCDC5Q6ZRR9 648 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 MUC20Q8N307 709 aaPredicted RBP22.57■■□□□ 1.2
SSBP4-202ENST00000348495 SMIM4Q8WVI0 70 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 PERPQ96FX8 193 aa22.57■■□□□ 1.2
SSBP4-202ENST00000348495 A0A1B0GW55 424 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 J3QRK9 145 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 GSTZ1O43708 216 aaPredicted RBP22.56■■□□□ 1.2
SSBP4-202ENST00000348495 SSX5O60225 188 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 DUX4L2P0CJ85 424 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 DUX4L3P0CJ86 424 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 DUX4L4P0CJ87 422 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 DUX4L5P0CJ88 424 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 DUX4L6P0CJ89 424 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 DUX4L7P0CJ90 424 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 DNASE1P24855 282 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 GUCA2AQ02747 115 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 CARTPTQ16568 116 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 TMEM155Q4W5P6 130 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 DUX4L9Q6RFH8 374 aaPredicted RBP22.56■■□□□ 1.2
SSBP4-202ENST00000348495 ZNRF1Q8ND25 227 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 OR4S1Q8NGB4 309 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 GPX8Q8TED1 209 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 DYRK2Q92630 601 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 PPA2Q9H2U2 334 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 SCPEP1Q9HB40 452 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 DUX4Q9UBX2 424 aa22.56■■□□□ 1.2
SSBP4-202ENST00000348495 GABARAPH6UMI1 98 aa22.55■■□□□ 1.2
SSBP4-202ENST00000348495 K7N7A8 449 aa22.55■■□□□ 1.2
SSBP4-202ENST00000348495 PDLIM4P50479 330 aa22.55■■□□□ 1.2
SSBP4-202ENST00000348495 DGCR2P98153 550 aa22.55■■□□□ 1.2
SSBP4-202ENST00000348495 Q8N402 240 aa22.55■■□□□ 1.2
SSBP4-202ENST00000348495 FAM216BQ8N7L0 139 aa22.55■■□□□ 1.2
SSBP4-202ENST00000348495 ASCC1Q8N9N2 400 aaKnown RBP22.55■■□□□ 1.2
SSBP4-202ENST00000348495 NUDCD2Q8WVJ2 157 aa22.55■■□□□ 1.2
SSBP4-202ENST00000348495 MBD6Q96DN6 1003 aa22.55■■□□□ 1.2
SSBP4-202ENST00000348495 SNX22Q96L94 193 aa22.55■■□□□ 1.2
SSBP4-202ENST00000348495 NKX6-3A6NJ46 265 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 CSN2P05814 226 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 SELLP14151 372 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 GPR6P46095 362 aaPredicted RBP22.54■■□□□ 1.2
SSBP4-202ENST00000348495 IL13RA1P78552 427 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 LYPD2Q6UXB3 125 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 OR52I2Q8NH67 350 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 CHST6Q9GZX3 395 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 FAM234AQ9H0X4 552 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 NBPF19A0A087WUL8 3843 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 ANKRD17O75179 2603 aaKnown RBP22.54■■□□□ 1.2
SSBP4-202ENST00000348495 SULT1C2O00338 296 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 TMPRSS2O15393 492 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 KCNJ3P48549 501 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 GNG2P59768 71 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 PAX5Q02548 391 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 DEFB113Q30KQ7 82 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 GAPTQ8N292 157 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 PLPPR1Q8TBJ4 325 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 NEK7Q8TDX7 302 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 NINJ1Q92982 152 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 MED30Q96HR3 178 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 CTSZQ9UBR2 303 aa22.54■■□□□ 1.2
SSBP4-202ENST00000348495 FLNBO75369 2602 aaKnown RBP22.53■■□□□ 1.2
SSBP4-202ENST00000348495 NAV2Q8IVL1 2488 aa22.53■■□□□ 1.2
SSBP4-202ENST00000348495 ISPDA4D126 451 aa22.53■■□□□ 1.2
SSBP4-202ENST00000348495 CEACAM18A8MTB9 384 aa22.53■■□□□ 1.2
SSBP4-202ENST00000348495 TK1P04183 234 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms