RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 EWSR1Q01844 656 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS50-202ENST00000305866 POU3F1Q03052 451 aaPredicted RBP4.67□□□□□ -1.66
VPS50-202ENST00000305866 ARL16Q0P5N6 197 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 MSMO1Q15800 293 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 C9orf152Q5JTZ5 239 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 LINC00596Q86U02 117 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 ZNF664Q8N3J9 261 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 C10orf53Q8N6V4 93 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 Q8N976 141 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 GJC3Q8NFK1 279 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 OR10AD1Q8NGE0 317 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 OR1J1Q8NGS3 322 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 TCEAL3Q969E4 200 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 SGK3Q96BR1 496 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 NUDT22Q9BRQ3 303 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 OR10A2Q9H208 303 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 COMMD9Q9P000 198 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 ABCA7Q8IZY2 2146 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 C1orf196B1AJZ1 125 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 UMAD1C9J7I0 102 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 CDS2O95674 445 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 FAHP16930 419 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 GFRA1P56159 465 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 TAS2R60P59551 318 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 PRDX4Q13162 271 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 GAMTQ14353 236 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 PMS2CLQ68D20 193 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 PLXDC2Q6UX71 529 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 SELENOHQ8IZQ5 122 aaKnown RBP4.66□□□□□ -1.66
VPS50-202ENST00000305866 OR51T1Q8NGJ9 327 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 OR10G8Q8NGN5 311 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 OR2AJ1Q8NGZ0 328 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 MBD3L1Q8WWY6 194 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 IL22RA2Q969J5 263 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 MISP3Q96FF7 219 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 TCEAL7Q9BRU2 100 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 PDCD10Q9BUL8 212 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 PARP12Q9H0J9 701 aaKnown RBP4.66□□□□□ -1.66
VPS50-202ENST00000305866 VSIRQ9H7M9 311 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 KIAA1456Q9P272 454 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 OR14J1Q9UGF5 321 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 MMP24Q9Y5R2 645 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 GOLGA4Q13439 2230 aaKnown RBP4.66□□□□□ -1.66
VPS50-202ENST00000305866 TRBV11-1A0A0K0K1C0 115 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 E5RGE8 158 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 SLC31A2O15432 143 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 ZNF205O95201 554 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 IGKV1D-33P01593 117 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 IGKV1-33P01594 117 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 S100A6P06703 90 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 VAMP1P23763 118 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 ATP6V0CP27449 155 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 RAB5CP51148 216 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 AKR1D1P51857 326 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 RRADP55042 308 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 BRWD1-AS2P59051 145 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 PAX5Q02548 391 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 TMEM211Q6ICI0 200 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 KLHL24Q6TFL4 600 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 FIP1L1Q6UN15 594 aaKnown RBP4.66□□□□□ -1.66
VPS50-202ENST00000305866 SLC35E3Q7Z769 313 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 METTL27Q8N6F8 245 aaPredicted RBP4.66□□□□□ -1.66
VPS50-202ENST00000305866 OR10G3Q8NGC4 313 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 DYRK2Q92630 601 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 NAT6Q93015 286 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 C5orf30Q96GV9 206 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 URM1Q9BTM9 101 aaKnown RBP4.66□□□□□ -1.66
VPS50-202ENST00000305866 C20orf24Q9BUV8 137 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 EMC6Q9BV81 110 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 TMEM59Q9BXS4 323 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 OPA3Q9H6K4 179 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 C1orf123Q9NWV4 160 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 NSG2Q9Y328 171 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 STRAPQ9Y3F4 350 aaKnown RBP4.66□□□□□ -1.66
VPS50-202ENST00000305866 PDE4DIPQ5VU43 2346 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 hCG_38984A0A1B0GV85 526 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 MED19A0JLT2 244 aaPredicted RBP4.66□□□□□ -1.66
VPS50-202ENST00000305866 C5orf51A6NDU8 294 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 RBFOX3A6NFN3 312 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 GJE1A6NN92 205 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 IFNL4K9M1U5 179 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 CYTIPO60759 359 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 TRGC1P0CF51 173 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 PET100P0DJ07 73 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 FUT3P21217 361 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 NPPCP23582 126 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 SRD5A2P31213 254 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 IL2RGP31785 369 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 RAC3P60763 192 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 RPL15P61313 204 aaKnown RBP4.66□□□□□ -1.66
VPS50-202ENST00000305866 IAH1Q2TAA2 248 aaPredicted RBP4.66□□□□□ -1.66
VPS50-202ENST00000305866 TSPO2Q5TGU0 170 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 ZNF468Q5VIY5 522 aaPredicted RBP4.66□□□□□ -1.66
VPS50-202ENST00000305866 Q6ZRM9 215 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 TMEM144Q7Z5S9 345 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 SLC35G3Q8N808 338 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 AGBL5Q8NDL9 886 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 FAM216AQ8WUB2 273 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 REEP6Q96HR9 211 aa4.66□□□□□ -1.66
VPS50-202ENST00000305866 BCO1Q9HAY6 547 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms