RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 A6NLC8 198 aa14.95□□□□□ -0.02
SHKBP1-224ENST00000600718 SHISA9B4DS77 424 aa14.95□□□□□ -0.02
SHKBP1-224ENST00000600718 OR4A8P0C604 315 aa14.95□□□□□ -0.02
SHKBP1-224ENST00000600718 ZNF81P51508 661 aa14.95□□□□□ -0.02
SHKBP1-224ENST00000600718 RAG2P55895 527 aa14.95□□□□□ -0.02
SHKBP1-224ENST00000600718 PRAMEF6Q5VXH4 476 aa14.95□□□□□ -0.02
SHKBP1-224ENST00000600718 CYYR1Q96J86 154 aa14.95□□□□□ -0.02
SHKBP1-224ENST00000600718 DHRS9Q9BPW9 319 aa14.95□□□□□ -0.02
SHKBP1-224ENST00000600718 IFT22Q9H7X7 185 aa14.95□□□□□ -0.02
SHKBP1-224ENST00000600718 NUDT15Q9NV35 164 aa14.95□□□□□ -0.02
SHKBP1-224ENST00000600718 RCC2Q9P258 522 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-224ENST00000600718 IL36RNQ9UBH0 155 aa14.95□□□□□ -0.02
SHKBP1-224ENST00000600718 ZDHHC8Q9ULC8 765 aa14.95□□□□□ -0.02
SHKBP1-224ENST00000600718 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 M0QYG6 137 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 NXPH2O95156 264 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 GLAP06280 429 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 H2AFB2P0C5Z0 115 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 DTYMKP23919 212 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 IKZF1Q13422 519 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 MPPED2Q15777 294 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 ACTBL2Q562R1 376 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 RNASE10Q5GAN6 216 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 BEX5Q5H9J7 111 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 OR52W1Q6IF63 320 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 OR4K15Q8NH41 348 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 OR56B4Q8NH76 319 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 SNAPC3Q92966 411 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 ST6GALNAC5Q9BVH7 336 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 BEX2Q9BXY8 128 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 TINAGL1Q9GZM7 467 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 CHST6Q9GZX3 395 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 EDARQ9UNE0 448 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 LOC105371267A0A1B0GV96 52 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 DISC1C4P0D8 188 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 SPRY3O43610 288 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 CLDN14O95500 239 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 DHFRP00374 187 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 BRICD5Q6PL45 260 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 FIP1L1Q6UN15 594 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 WDR82Q6UXN9 313 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 ZNF826PQ6ZT77 177 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 OR51S1Q8NGJ8 323 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 MEGF10Q96KG7 1140 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 HES4Q9HCC6 221 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 NPDC1Q9NQX5 325 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 UFSP2Q9NUQ7 469 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 ING3Q9NXR8 418 aa14.94□□□□□ -0.02
SHKBP1-224ENST00000600718 TRAV6A0A075B6T7 132 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 UBE2QL1A1L167 161 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 MCRIP1C9JLW8 97 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 NDUFB6O95139 128 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 AMY2AP04746 511 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 TNFSF4P23510 183 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 DUSP1P28562 367 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 TATDN3Q17R31 274 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 DMRTC2Q8IXT2 367 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 BPIFB2Q8N4F0 458 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 BEST4Q8NFU0 473 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 ITLN2Q8WWU7 325 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 MARVELD3Q96A59 401 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 DIRC2Q96SL1 478 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 C1orf123Q9NWV4 160 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 SCP2D1Q9UJQ7 156 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 DEGS1O15121 323 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 ZG16O60844 167 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 ZNF735P0CB33 412 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 AMY2BP19961 511 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 SERPINF1P36955 418 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 CFHR2P36980 270 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 RAB25P57735 213 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 ZNF146Q15072 292 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 RBMS2Q15434 407 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 SPIN3Q5JUX0 258 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 OR10Z1Q8NGY1 313 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 OR2V2Q96R30 315 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 HDHD3Q9BSH5 251 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 C20orf85Q9H1P6 137 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 IL19Q9UHD0 177 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 ZNF230Q9UIE0 474 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 ALG5Q9Y673 324 aa14.93□□□□□ -0.02
SHKBP1-224ENST00000600718 E7EQL1 145 aa14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 SHOXO15266 292 aa14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 IGHV1-46P01743 117 aa14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 HRH1P35367 487 aa14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 AP2S1P53680 142 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 TAS2R46P59540 309 aa14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 Q6P435 159 aa14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 IQCF2Q8IXL9 164 aa14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 SLC6A7Q99884 636 aa14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 FN3KRPQ9HA64 309 aa14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 ZNF701Q9NV72 531 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 SLC2A8Q9NY64 477 aa14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 RASL12Q9NYN1 266 aa14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 GLS2Q9UI32 602 aa14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 RNF115Q9Y4L5 304 aa14.92□□□□□ -0.02
SHKBP1-224ENST00000600718 hCG_1807616A0A1W2PRN6 198 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 SH2D1BO14796 132 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 PMP2P02689 132 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 IFNA6P05013 189 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms