RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.52□□□□□ -1.69
DNMT1-220ENST00000589351 AQP12AQ8IXF9 295 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 KLHDC1Q8N7A1 406 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 MINDY2Q8NBR6 621 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 PROKR2Q8NFJ6 384 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 OR1M1Q8NGA1 313 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 OR5T2Q8NGG2 359 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 OR52L1Q8NGH7 329 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 OR52H1Q8NGJ2 320 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 OR2AE1Q8NHA4 323 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 RP9Q8TA86 221 aaKnown RBP4.52□□□□□ -1.69
DNMT1-220ENST00000589351 C8orf46Q8TAG6 207 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 FANK1Q8TC84 345 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 MCUR1Q96AQ8 359 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 DAZAP1Q96EP5 407 aaKnown RBP4.52□□□□□ -1.69
DNMT1-220ENST00000589351 NKX3-1Q99801 234 aaPredicted RBP4.52□□□□□ -1.69
DNMT1-220ENST00000589351 COPS4Q9BT78 406 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 RTL8AQ9BWD3 113 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 CDCA4Q9BXL8 241 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 SEMA6AQ9H2E6 1030 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 OR52D1Q9H346 318 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 EFCAB1Q9HAE3 211 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 ABCB10Q9NRK6 738 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 CNOT2Q9NZN8 540 aaKnown RBP4.52□□□□□ -1.69
DNMT1-220ENST00000589351 UBQLN2Q9UHD9 624 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 ZNF391Q9UJN7 358 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 PITPNC1Q9UKF7 332 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 SAMD4AQ9UPU9 718 aaKnown RBP4.52□□□□□ -1.69
DNMT1-220ENST00000589351 FOXJ3Q9UPW0 622 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 GAB2Q9UQC2 676 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 MPC1Q9Y5U8 109 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 NOTCH1P46531 2555 aa4.52□□□□□ -1.69
DNMT1-220ENST00000589351 OR6C68A6NDL8 312 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 WRBO00258 174 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 ACOT8O14734 319 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 ANGPTL7O43827 346 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 DUS4LO95620 317 aaKnown RBP4.51□□□□□ -1.69
DNMT1-220ENST00000589351 CLIC3O95833 236 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 ALDOBP05062 364 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 ACAA1P09110 424 aaPredicted RBP4.51□□□□□ -1.69
DNMT1-220ENST00000589351 RPA2P15927 270 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 GLRA1P23415 457 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 PRDX6P30041 224 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 OTX1P32242 354 aaPredicted RBP4.51□□□□□ -1.69
DNMT1-220ENST00000589351 HTR2BP41595 481 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 GABRA2P47869 451 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 SERTAD4-AS1Q5TG53 156 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 GLYATQ6IB77 296 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 KCTD8Q6ZWB6 473 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 SLC16A9Q7RTY1 509 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 DCXRQ7Z4W1 244 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 ZDHHC23Q8IYP9 409 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 LINC00471Q8N535 108 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 RNF148Q8N7C7 305 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 FAM216BQ8N7L0 139 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 Q8N7P7 452 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 SDR9C7Q8NEX9 313 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 GNPDA2Q8TDQ7 276 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 FAM46BQ96A09 425 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 SLC7A6OSQ96CW6 309 aaPredicted RBP4.51□□□□□ -1.69
DNMT1-220ENST00000589351 SLAMF6Q96DU3 332 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 DUS3LQ96G46 650 aaKnown RBP4.51□□□□□ -1.69
DNMT1-220ENST00000589351 REEP6Q96HR9 211 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 KCTD14Q9BQ13 255 aaPredicted RBP4.51□□□□□ -1.69
DNMT1-220ENST00000589351 PRSS22Q9GZN4 317 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 RGCCQ9H4X1 137 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 PNRC2Q9NPJ4 139 aaKnown RBP4.51□□□□□ -1.69
DNMT1-220ENST00000589351 SAR1AQ9NR31 198 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 CMTM6Q9NX76 183 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.51□□□□□ -1.69
DNMT1-220ENST00000589351 CD300AQ9UGN4 299 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 SIGLEC9Q9Y336 463 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 PLXNB1O43157 2135 aa4.51□□□□□ -1.69
DNMT1-220ENST00000589351 TRBV4-1A0A0J9YWV2 114 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 HELTA6NFD8 242 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 OR2AT4A6NND4 320 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 E9PQ18 207 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 ZNF593O00488 134 aaPredicted RBP4.5□□□□□ -1.69
DNMT1-220ENST00000589351 CCDC22O60826 627 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 SLC2A1P11166 492 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 ANXA7P20073 488 aaKnown RBP4.5□□□□□ -1.69
DNMT1-220ENST00000589351 RRM2P31350 389 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 CX3CR1P49238 355 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 ENTPD1P49961 510 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 CNN1P51911 297 aaKnown RBP4.5□□□□□ -1.69
DNMT1-220ENST00000589351 FXYD6P3P58550 94 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 FAM3AP98173 230 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 HOXA4Q00056 320 aaPredicted RBP4.5□□□□□ -1.69
DNMT1-220ENST00000589351 TSPAN31Q12999 210 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 KLRD1Q13241 179 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 COTL1Q14019 142 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 TEX30Q5JUR7 227 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 SAMD4BQ5PRF9 694 aaKnown RBP4.5□□□□□ -1.69
DNMT1-220ENST00000589351 STUMQ69YW2 141 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 ZNF788Q6ZQV5 615 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 ZBTB49Q6ZSB9 765 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 SHFQ7M4L6 423 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 C11orf53Q8IXP5 236 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 ZNF565Q8N9K5 539 aa4.5□□□□□ -1.69
DNMT1-220ENST00000589351 ANGPTL6Q8NI99 470 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms