RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 MRI1Q9BV20 369 aa13.08□□□□□ -0.32
SPG7-204ENST00000561911 TMEM82A0PJX8 343 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 SIRPB1O00241 398 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 DEGS1O15121 323 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 ZNF737O75373 536 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 PAHP00439 452 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 ZNF44P15621 663 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 RORCP51449 518 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 SEC61A1P61619 476 aaKnown RBP13.07□□□□□ -0.32
SPG7-204ENST00000561911 SCN1BQ07699 218 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 PLA2G7Q13093 441 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 PDCD1Q15116 288 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 MPV17LQ2QL34 196 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 ZNF841Q6ZN19 808 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 CIARTQ8N365 385 aaPredicted RBP13.07□□□□□ -0.32
SPG7-204ENST00000561911 ZNF561Q8N587 486 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 ASCC1Q8N9N2 400 aaKnown RBP13.07□□□□□ -0.32
SPG7-204ENST00000561911 CHST4Q8NCG5 386 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 ZNRF1Q8ND25 227 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 TMEM185AQ8NFB2 350 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 COX4I2Q96KJ9 171 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 URM1Q9BTM9 101 aaKnown RBP13.07□□□□□ -0.32
SPG7-204ENST00000561911 TM2D1Q9BX74 207 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 ABRACLQ9P1F3 81 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 RAB22AQ9UL26 194 aa13.07□□□□□ -0.32
SPG7-204ENST00000561911 FAM90A10PA6NDY2 464 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 FAM90A18PA6NE21 464 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 FAM90A16PA6NEW6 464 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 FAM90A20PA6NIJ5 464 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 FAM90A8PA6NJQ4 464 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 FAM90A7PA6NKC0 464 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 FAM90A22PA8MWA6 464 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 FAM90A12PA8MX19 464 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 FAM90A5PA8MXJ8 464 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 FAM90A23PA8MXZ1 464 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 DVL1O14640 695 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 NDUFB3O43676 98 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 OR7C1O76099 320 aaPredicted RBP13.06□□□□□ -0.32
SPG7-204ENST00000561911 FAM90A15PP0C7V4 464 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 FAM90A13PP0C7W8 464 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 FAM90A14PP0C7W9 464 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 FAM90A24PP0C7X0 464 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 RAB6AP20340 208 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 GABRR1P24046 479 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 LMO1P25800 156 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 EFNB2P52799 333 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 SCAND1P57086 179 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 ESCO2Q56NI9 601 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 LRRC10Q5BKY1 277 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 WDR25Q64LD2 544 aaPredicted RBP13.06□□□□□ -0.32
SPG7-204ENST00000561911 METAP1DQ6UB28 335 aaPredicted RBP13.06□□□□□ -0.32
SPG7-204ENST00000561911 DYNC2LI1Q8TCX1 351 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 PTX4Q96A99 478 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 KCTD12Q96CX2 325 aaKnown RBP13.06□□□□□ -0.32
SPG7-204ENST00000561911 POM121Q96HA1 1249 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 C1orf159Q96HA4 380 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 LPAR5Q9H1C0 372 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 IFT22Q9H7X7 185 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 ZNF581Q9P0T4 197 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 CLN8Q9UBY8 286 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 ETV7Q9Y603 341 aa13.06□□□□□ -0.32
SPG7-204ENST00000561911 TRAV24A0A0B4J272 114 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 FAM157AC9JC47 383 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 K7N7A8 449 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 SLC33A1O00400 549 aaPredicted RBP13.05□□□□□ -0.32
SPG7-204ENST00000561911 SMAD7O15105 426 aaKnown RBP13.05□□□□□ -0.32
SPG7-204ENST00000561911 PSPNO60542 156 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 FCN3O75636 299 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 ZNF182P17025 639 aaPredicted RBP13.05□□□□□ -0.32
SPG7-204ENST00000561911 SOX6P35712 828 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 NPY4RP50391 375 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 GNB2P62879 340 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 TMEM249Q2WGJ8 235 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 FOXB2Q5VYV0 432 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 C17orf107Q6ZR85 190 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 FGFRL1Q8N441 504 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 OR5H6Q8NGV6 325 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 ST8SIA4Q92187 359 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 DGCR14Q96DF8 476 aaKnown RBP13.05□□□□□ -0.32
SPG7-204ENST00000561911 SNX22Q96L94 193 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 NICN1Q9BSH3 213 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 SSBP3Q9BWW4 388 aaPredicted RBP13.05□□□□□ -0.32
SPG7-204ENST00000561911 FAM234AQ9H0X4 552 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 SPACA1Q9HBV2 294 aa13.05□□□□□ -0.32
SPG7-204ENST00000561911 CCDC59Q9P031 241 aaKnown RBP13.05□□□□□ -0.32
SPG7-204ENST00000561911 RCC2Q9P258 522 aaKnown RBP13.05□□□□□ -0.32
SPG7-204ENST00000561911 SLC25A10Q9UBX3 287 aaPredicted RBP13.05□□□□□ -0.32
SPG7-204ENST00000561911 MED13LQ71F56 2210 aa13.04□□□□□ -0.32
SPG7-204ENST00000561911 A0A0A6YYD4 124 aa13.04□□□□□ -0.32
SPG7-204ENST00000561911 KIAA1324LA8MWY0 1029 aaPredicted RBP13.04□□□□□ -0.32
SPG7-204ENST00000561911 A8MXK9 166 aa13.04□□□□□ -0.32
SPG7-204ENST00000561911 H3BUI4 141 aa13.04□□□□□ -0.32
SPG7-204ENST00000561911 PHF1O43189 567 aaPredicted RBP13.04□□□□□ -0.32
SPG7-204ENST00000561911 FOXH1O75593 365 aa13.04□□□□□ -0.32
SPG7-204ENST00000561911 TK1P04183 234 aa13.04□□□□□ -0.32
SPG7-204ENST00000561911 NDUFB7P17568 137 aa13.04□□□□□ -0.32
SPG7-204ENST00000561911 ZFP36P26651 326 aaKnown RBP13.04□□□□□ -0.32
SPG7-204ENST00000561911 OR3A1P47881 315 aa13.04□□□□□ -0.32
SPG7-204ENST00000561911 DYNC1I2Q13409 638 aaKnown RBP13.04□□□□□ -0.32
SPG7-204ENST00000561911 FAM189A2Q15884 450 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms