RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 ERICH4A6NGS2 130 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TVP23AA6NH52 213 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 A8MUN3 132 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 C8orf87E5RJ46 101 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 H0Y8G0 127 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 H3BP45 60 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 DFFAO00273 331 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 RNF113AO15541 343 aaKnown RBP0.02□□□□□ -2.41
FOXN3-216ENST00000557496 XRCC2O43543 280 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CACNG3O60359 315 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 GMDSO60547 372 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 PSIP1O75475 530 aaKnown RBP0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CRTAPO75718 401 aaPredicted RBP0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CIB2O75838 187 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SOX14O95416 240 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ETHE1O95571 254 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TTC4O95801 387 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SOD1P00441 154 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 PDYNP01213 254 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 P01737 135 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 OPN1SWP03999 348 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CDK1P06493 297 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 FGF4P08620 206 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 OR4Q2P0C623 313 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 GTF2F2P13984 249 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ZNF7P17097 686 aaPredicted RBP0.02□□□□□ -2.41
FOXN3-216ENST00000557496 HLA-GP17693 338 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TAC1P20366 129 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CNTFRP26992 372 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 PSMB9P28065 219 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 IMPA1P29218 277 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CCT6AP40227 531 aaKnown RBP0.02□□□□□ -2.41
FOXN3-216ENST00000557496 GPR1P46091 355 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 PLTPP55058 493 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 AP1S2P56377 157 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CLDN6P56747 220 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 C21orf59P57076 290 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 RGS8P57771 180 aaPredicted RBP0.02□□□□□ -2.41
FOXN3-216ENST00000557496 MTPNP58546 118 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 LCN2P80188 198 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 DEFA6Q01524 100 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 RAD51Q06609 339 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 IFFO1Q0D2I5 559 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ADIGQ0VDE8 80 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 DYNC1I2Q13409 638 aaKnown RBP0.02□□□□□ -2.41
FOXN3-216ENST00000557496 IDI1Q13907 227 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TFDP2Q14188 446 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 PDGFRLQ15198 375 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 MAPRE2Q15555 327 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CST6Q15828 149 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 BCL2A1Q16548 175 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 NDUFAF6Q330K2 333 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TMEM176BQ3YBM2 270 aaPredicted RBP0.02□□□□□ -2.41
FOXN3-216ENST00000557496 Q499Y3 187 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 HIKESHIQ53FT3 197 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ACTBL2Q562R1 376 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TTC32Q5I0X7 151 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SPANXN2Q5MJ10 180 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 C10orf91Q5T1B1 145 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 FAM27D1Q5T7N8 215 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 GLYATQ6IB77 296 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TWF2Q6IBS0 349 aaKnown RBP0.02□□□□□ -2.41
FOXN3-216ENST00000557496 NIPAL1Q6NVV3 410 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 RWDD4Q6NW29 188 aaKnown RBP0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ERICH5Q6P6B1 374 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TTC23LQ6PF05 361 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 FAM231DQ6ZW35 169 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 EIF3MQ7L2H7 374 aaKnown RBP0.02□□□□□ -2.41
FOXN3-216ENST00000557496 NANOGNBQ7Z5D8 188 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 GALNT10Q86SR1 603 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 LUZP2Q86TE4 346 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 LINC00596Q86U02 117 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 KATNAL2Q8IYT4 538 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SLC7A5P1Q8MH63 180 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CYP4Z2PQ8N1L4 340 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 BBS5Q8N3I7 341 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CCNYL1Q8N7R7 359 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ZIC4Q8N9L1 334 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 C15orf53Q8NAA6 179 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 OR10P1Q8NGE3 313 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 OR4A15Q8NGL6 344 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 OR51A7Q8NH64 312 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 MFSD8Q8NHS3 518 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 NDNFQ8TB73 568 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ORAOV1Q8WV07 137 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 NAT6Q93015 286 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TOP1MTQ969P6 601 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CLDN23Q96B33 292 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TMIGD2Q96BF3 282 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ADTRPQ96IZ2 230 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SMIM8Q96KF7 97 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 DNAJC30Q96LL9 226 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 OPALINQ96PE5 141 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 GPR21Q99679 349 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 C11orf70Q9BRQ4 267 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CALN1Q9BXU9 219 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 MRPL20Q9BYC9 149 aaKnown RBP0.02□□□□□ -2.41
FOXN3-216ENST00000557496 PKIBQ9C010 78 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SRRQ9GZT4 340 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 FAM192AQ9GZU8 254 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms