RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 ABHD12Q8N2K0 398 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 OR51A4Q8NGJ6 313 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 OR5D18Q8NGL1 313 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 OR2G2Q8NGZ5 317 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 GABARAPL1Q9H0R8 117 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 GNG8Q9UK08 70 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 GSTK1Q9Y2Q3 226 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 MGST3O14880 152 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 GATBO75879 557 aaKnown RBP9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 SULT1C4O75897 302 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 ATF1P18846 271 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 AZGP1P25311 298 aaKnown RBP9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 HTR1DP28221 377 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 ATP1B3P54709 279 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 MTCP1P56278 107 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 P2RX3P56373 397 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 PDZK1IP1Q13113 114 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 Q6P435 159 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 CENPVQ7Z7K6 275 aaPredicted RBP9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 TRAPPC6BQ86SZ2 158 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 MYDGFQ969H8 173 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 COQ2Q96H96 371 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 SLC25A33Q9BSK2 321 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 ADI1Q9BV57 179 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 PRRG3Q9BZD7 231 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 PPIL3Q9H2H8 161 aaKnown RBP9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 RIBC2Q9H4K1 309 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 SEBOXQ9HB31 216 aaPredicted RBP9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 HMG20AQ9NP66 347 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 INPP5EQ9NRR6 644 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 DPM3Q9P2X0 92 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 HHLA2Q9UM44 414 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 BOLA1Q9Y3E2 137 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 RYR3Q15413 4870 aa9.2□□□□□ -0.94
PRPF40B-212ENST00000551111 TCRBV4S1A1TA0A5B7 111 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 SAC3D1A6NKF1 404 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 LY6LH3BQJ8 138 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 J3QRE1 110 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 SERPINA3P01011 423 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 IGHV3-7P01780 117 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 ERP29P30040 261 aaKnown RBP9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 BDH1Q02338 343 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 SCN1BQ07699 218 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 C17orf58Q2M2W7 97 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 HEPN1Q6WQI6 88 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 C18orf65Q6ZTR6 163 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 ZDHHC13Q8IUH4 622 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 DTX3Q8N9I9 347 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 DNAAF1Q8NEP3 725 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 CORO2AQ92828 525 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 STMN2Q93045 179 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 RBMXL1Q96E39 390 aaKnown RBP9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 GABARAPL3Q9BY60 117 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 OAZ3Q9UMX2 235 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 UBE2J1Q9Y385 318 aaPredicted RBP9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 AP4S1Q9Y587 144 aa9.19□□□□□ -0.94
PRPF40B-212ENST00000551111 SH2D1BO14796 132 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 UBCP0CG48 685 aaKnown RBP9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 PF4V1P10720 104 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 FASP25445 335 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 LMO1P25800 156 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 HOXD3P31249 432 aaPredicted RBP9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 ATP6V1E1P36543 226 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 DIAPH2-AS1Q14236 149 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 CDK5R1Q15078 307 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 ETV3LQ6ZN32 361 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 UTS2BQ765I0 119 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 ZNF329Q86UD4 541 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 Q8IYB0 196 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 ENTHD1Q8IYW4 607 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 OR13C9Q8NGT0 318 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 PP6455Q8WZ26 134 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 LEAP2Q969E1 77 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 OPALINQ96PE5 141 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 RBM14Q96PK6 669 aaKnown RBP9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 MBOAT4Q96T53 435 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 OSBPL10Q9BXB5 764 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 LIN7BQ9HAP6 207 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 ZNF581Q9P0T4 197 aa9.18□□□□□ -0.94
PRPF40B-212ENST00000551111 ODAMA1E959 279 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 OR4C45A6NMZ5 311 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 BUB1B-PAK6H3BSN5 160 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 SLC33A1O00400 549 aaPredicted RBP9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 KDM4BO94953 1096 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 ISG15P05161 165 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 CGB3P0DN86 165 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 CGB7P0DN87 165 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 CD34P28906 385 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 OR3A4PP47883 348 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 BNIP1Q12981 228 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 RBM39Q14498 530 aaKnown RBP9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 ATXN7L3Q14CW9 347 aaPredicted RBP9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 HLA-DRB5Q30154 266 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 C9orf152Q5JTZ5 239 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 SPIN3Q5JUX0 258 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 TPTE2P1Q5T6R2 138 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 TMEM244Q5VVB8 128 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 FDX2Q6P4F2 183 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 LHFPL2Q6ZUX7 228 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 OR8J1Q8NGP2 316 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 668.7 ms