RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 HDHD3Q9BSH5 251 aaPredicted RBP20.11■□□□□ 0.81
FOXA1-202ENST00000545425 ST3GAL6Q9Y274 331 aa20.11■□□□□ 0.81
FOXA1-202ENST00000545425 MMP7P09237 267 aaPredicted RBP20.11■□□□□ 0.81
FOXA1-202ENST00000545425 CYB561P49447 251 aa20.11■□□□□ 0.81
FOXA1-202ENST00000545425 DVL1P1P54792 670 aaPredicted RBP20.11■□□□□ 0.81
FOXA1-202ENST00000545425 HERV-K104P61576 105 aa20.11■□□□□ 0.81
FOXA1-202ENST00000545425 PLCXD3Q63HM9 321 aa20.11■□□□□ 0.81
FOXA1-202ENST00000545425 SKA3Q8IX90 412 aa20.11■□□□□ 0.81
FOXA1-202ENST00000545425 FBXL14Q8N1E6 418 aa20.11■□□□□ 0.81
FOXA1-202ENST00000545425 OR10Z1Q8NGY1 313 aa20.11■□□□□ 0.81
FOXA1-202ENST00000545425 AKR7LQ8NHP1 331 aa20.11■□□□□ 0.81
FOXA1-202ENST00000545425 OPA3Q9H6K4 179 aa20.11■□□□□ 0.81
FOXA1-202ENST00000545425 RNASEK-C17orf49H0YIS7 233 aa20.1■□□□□ 0.81
FOXA1-202ENST00000545425 PVALBP20472 110 aaPredicted RBP20.1■□□□□ 0.81
FOXA1-202ENST00000545425 PAX6P26367 422 aa20.1■□□□□ 0.81
FOXA1-202ENST00000545425 TMEM33P57088 247 aa20.1■□□□□ 0.81
FOXA1-202ENST00000545425 HES3Q5TGS1 186 aa20.1■□□□□ 0.81
FOXA1-202ENST00000545425 C6orf15Q6UXA7 325 aaPredicted RBP20.1■□□□□ 0.81
FOXA1-202ENST00000545425 SLC2A9Q9NRM0 540 aa20.1■□□□□ 0.81
FOXA1-202ENST00000545425 STRAPQ9Y3F4 350 aaKnown RBP20.1■□□□□ 0.81
FOXA1-202ENST00000545425 DUXBA0A1W2PPF3 345 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 RPL36A-HNRNPH2H7BZ11 118 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 MSTNO14793 375 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 CDS2O95674 445 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 GFRA1P56159 465 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 RND3P61587 244 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 GUCA2BQ16661 112 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 HFEQ30201 348 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 SLC22A25Q6T423 547 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.09■□□□□ 0.81
FOXA1-202ENST00000545425 ALKBH3Q96Q83 286 aaPredicted RBP20.09■□□□□ 0.81
FOXA1-202ENST00000545425 HRH4Q9H3N8 390 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 KPTNQ9Y664 436 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 SPEGQ15772 3267 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 GEMIN2O14893 280 aaKnown RBP20.09■□□□□ 0.81
FOXA1-202ENST00000545425 ZNF92Q03936 586 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 ESX1Q8N693 406 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 SPIN2AQ99865 258 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 SPIN2BQ9BPZ2 258 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 GINS3Q9BRX5 216 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 TLNRD1Q9H1K6 362 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 RNF122Q9H9V4 155 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 B4GALT7Q9UBV7 327 aa20.09■□□□□ 0.81
FOXA1-202ENST00000545425 MAP1BP46821 2468 aaKnown RBP20.08■□□□□ 0.81
FOXA1-202ENST00000545425 IGKV1-12A0A0C4DH73 117 aa20.08■□□□□ 0.8
FOXA1-202ENST00000545425 ST8SIA3O43173 380 aa20.08■□□□□ 0.8
FOXA1-202ENST00000545425 IGKV1D-12P01611 117 aa20.08■□□□□ 0.8
FOXA1-202ENST00000545425 OR5AC1P0C628 307 aa20.08■□□□□ 0.8
FOXA1-202ENST00000545425 LPAR6P43657 344 aa20.08■□□□□ 0.8
FOXA1-202ENST00000545425 FAM76BQ5HYJ3 339 aa20.08■□□□□ 0.8
FOXA1-202ENST00000545425 DMRTC1Q5HYR2 192 aa20.08■□□□□ 0.8
FOXA1-202ENST00000545425 BOLLQ8N9W6 283 aaKnown RBP20.08■□□□□ 0.8
FOXA1-202ENST00000545425 ZCCHC14Q8WYQ9 949 aaKnown RBP20.08■□□□□ 0.8
FOXA1-202ENST00000545425 TOMM40LQ969M1 308 aa20.08■□□□□ 0.8
FOXA1-202ENST00000545425 LSM5Q9Y4Y9 91 aaKnown RBP20.08■□□□□ 0.8
FOXA1-202ENST00000545425 KLF2Q9Y5W3 355 aaPredicted RBP20.08■□□□□ 0.8
FOXA1-202ENST00000545425 MBPP02686 304 aaPredicted RBP20.07■□□□□ 0.8
FOXA1-202ENST00000545425 CTXN2P0C2S0 81 aa20.07■□□□□ 0.8
FOXA1-202ENST00000545425 MUC1P15941 1255 aaPredicted RBP20.07■□□□□ 0.8
FOXA1-202ENST00000545425 GDF1P27539 372 aa20.07■□□□□ 0.8
FOXA1-202ENST00000545425 OTX2P32243 289 aa20.07■□□□□ 0.8
FOXA1-202ENST00000545425 NTF4P34130 210 aa20.07■□□□□ 0.8
FOXA1-202ENST00000545425 UCP2P55851 309 aa20.07■□□□□ 0.8
FOXA1-202ENST00000545425 OR2A2Q6IF42 318 aa20.07■□□□□ 0.8
FOXA1-202ENST00000545425 MSI2Q96DH6 328 aaKnown RBP20.07■□□□□ 0.8
FOXA1-202ENST00000545425 STRADBQ9C0K7 418 aa20.07■□□□□ 0.8
FOXA1-202ENST00000545425 LUZP4Q9P127 313 aa20.07■□□□□ 0.8
FOXA1-202ENST00000545425 TRAPPC6AO75865 159 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 MT-CO3P00414 261 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 OPRM1P35372 400 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 MPV17LQ2QL34 196 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 LINC00596Q86U02 117 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 GTF3AQ92664 365 aaKnown RBP20.06■□□□□ 0.8
FOXA1-202ENST00000545425 ZNF775Q96BV0 537 aaPredicted RBP20.06■□□□□ 0.8
FOXA1-202ENST00000545425 FAM173AQ9BQD7 235 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 DDA1Q9BW61 102 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 LIME1Q9H400 295 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 RIMS4Q9H426 269 aaPredicted RBP20.06■□□□□ 0.8
FOXA1-202ENST00000545425 IGF2RP11717 2491 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 AKAP13Q12802 2813 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 A0A0G2JMM0 328 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 A0A1W2PPB8 328 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 A0A1W2PRS3 328 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 KIR3DP1A8MWS1 328 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 DIRAS3O95661 229 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 RRADP55042 308 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 Q0VFX4 171 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 FOXO1Q12778 655 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 WIPI1Q5MNZ9 446 aaPredicted RBP20.06■□□□□ 0.8
FOXA1-202ENST00000545425 DPPA2Q7Z7J5 298 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 FOXRED2Q8IWF2 684 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 PIGCQ92535 297 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 MLXQ9UH92 298 aa20.06■□□□□ 0.8
FOXA1-202ENST00000545425 NOSIPQ9Y314 301 aaKnown RBP20.06■□□□□ 0.8
FOXA1-202ENST00000545425 FRYQ5TBA9 3013 aa20.05■□□□□ 0.8
FOXA1-202ENST00000545425 MRPL33O75394 65 aaKnown RBP20.05■□□□□ 0.8
FOXA1-202ENST00000545425 NME2P22392 152 aa20.05■□□□□ 0.8
FOXA1-202ENST00000545425 AKR1C2P52895 323 aa20.05■□□□□ 0.8
FOXA1-202ENST00000545425 AKR1C1Q04828 323 aa20.05■□□□□ 0.8
FOXA1-202ENST00000545425 PEA15Q15121 130 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms