RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 SLC22A6Q4U2R8 563 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 AWAT2Q6E213 333 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 SIGIRRQ6IA17 410 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 ZNF788Q6ZQV5 615 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 RTN4RL2Q86UN3 420 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 C1orf87Q8N0U7 546 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 OR5H6Q8NGV6 325 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 CLDND2Q8NHS1 167 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 SETD6Q8TBK2 473 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM3DQ96BQ1 224 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 SDSLQ96GA7 329 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 MED30Q96HR3 178 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 GAFA1Q96PS6 74 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 METTL9Q9H1A3 318 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 DCSTAMPQ9H295 470 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 BANF2Q9H503 90 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 RHOFQ9HBH0 211 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 DIABLOQ9NR28 239 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 CCDC59Q9P031 241 aaKnown RBP8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 NLKQ9UBE8 527 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 CR1P17927 2039 aa8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 TEP1Q99973 2627 aaKnown RBP8.89□□□□□ -0.99
NPIPB3-210ENST00000542817 YLPM1P49750 1951 aaKnown RBP8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 ABCA1O95477 2261 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 TRAV24A0A0B4J272 114 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 TMEM82A0PJX8 343 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 RNF223E7ERA6 249 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 ZNF737O75373 536 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 BPNT1O95861 308 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 KNG1P01042 644 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 IGHV2-5P01817 119 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 IRF2P14316 349 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 SNRPBP14678 240 aaKnown RBP8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 PRKACAP17612 351 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 RBM11P57052 281 aaKnown RBP8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 PDCD1Q15116 288 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 RSU1Q15404 277 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 USP43Q70EL4 1123 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 Q8IYB0 196 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM216BQ8N7L0 139 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 MAPK1IP1LQ8NDC0 245 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 GRPEL2Q8TAA5 225 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 RAB1CQ92928 201 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 EMG1Q92979 244 aaKnown RBP8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM46BQ96A09 425 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 CPNE2Q96FN4 548 aaPredicted RBP8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 C1orf159Q96HA4 380 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 Q96M66 194 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 CCL13Q99616 98 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 PIMREGQ9BSJ6 248 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 REG4Q9BYZ8 158 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 SHARPINQ9H0F6 387 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 LPAR5Q9H1C0 372 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 SLA2Q9H6Q3 261 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 NARFLQ9H6Q4 476 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 LIN7BQ9HAP6 207 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 KAAG1Q9UBP8 84 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 GHRLQ9UBU3 117 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 PEX16Q9Y5Y5 336 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 ARHGAP32A7KAX9 2087 aa8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.88□□□□□ -0.99
NPIPB3-210ENST00000542817 F8P00451 2351 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 TRAV38-1A0A0B4J264 116 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 KIAA1324LA8MWY0 1029 aaPredicted RBP8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM157AC9JC47 383 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 GEMIN2O14893 280 aaKnown RBP8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 SIGLEC5O15389 551 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 PSPNO60542 156 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 HTR3BO95264 441 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 APOA1P02647 267 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 UBBP0CG47 229 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 ARSBP15848 533 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 SLC25A16P16260 332 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 MGMTP16455 207 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 M6PRP20645 277 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 SERPINA2P20848 420 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 LMO1P25800 156 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 ZFP36P26651 326 aaKnown RBP8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 PRDX2P32119 198 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 RPS27AP62979 156 aaKnown RBP8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 LOXL1Q08397 574 aaPredicted RBP8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 MICBQ29980 383 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 SMIM21Q3B7S5 101 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 C17orf107Q6ZR85 190 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 OSR2Q8N2R0 312 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM89BQ8N5H3 189 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 PNLDC1Q8NA58 520 aaKnown RBP8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 MCFD2Q8NI22 146 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 DACT3Q96B18 629 aaPredicted RBP8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 SLC25A38Q96DW6 304 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 NICN1Q9BSH3 213 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 CCDC32Q9BV29 185 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 TM2D1Q9BX74 207 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 IFT22Q9H7X7 185 aa8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 PATZ1Q9HBE1 687 aaKnown RBP8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 RCC2Q9P258 522 aaKnown RBP8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 NSD1Q96L73 2696 aaPredicted RBP8.87□□□□□ -0.99
NPIPB3-210ENST00000542817 SLC33A1O00400 549 aaPredicted RBP8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 ZNF780AO75290 641 aaPredicted RBP8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 OR2H2O95918 312 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms