RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 DUXBA0A1W2PPF3 345 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 CYR61O00622 381 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 ORM1P02763 201 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 OR4C12Q96R67 309 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 FAM24AA6NFZ4 105 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 SHISA8B8ZZ34 492 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 CDC14BO60729 498 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 CTAG2O75638 210 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 INHBBP09529 407 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 OR1C1Q15619 314 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 PRSS54Q6PEW0 395 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 TMEM108Q6UXF1 575 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 C20orf196Q8IYI0 205 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 UBALD1Q8TB05 177 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 RAB24Q969Q5 203 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 SLC25A22Q9H936 323 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 CACNG5Q9UF02 275 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 MPC2O95563 127 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 MRPL58Q14197 206 aaKnown RBP8.85□□□□□ -0.99
COL4A6-208ENST00000538570 Q6ZNB5 142 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 C6orf201Q7Z4U5 140 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.85□□□□□ -0.99
COL4A6-208ENST00000538570 OR2C3Q8N628 320 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 DUSP18Q8NEJ0 188 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 VN1R1Q9GZP7 353 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 NCOR1P1Q9H4R4 102 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 SH2D2AQ9NP31 389 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 AMMECR1Q9Y4X0 333 aaPredicted RBP8.85□□□□□ -0.99
COL4A6-208ENST00000538570 H3BMH7 237 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 SRFP11831 508 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 AREGP15514 252 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 WIPI1Q5MNZ9 446 aaPredicted RBP8.85□□□□□ -0.99
COL4A6-208ENST00000538570 OR10A7Q8NGE5 316 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 OR2T10Q8NGZ9 312 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 TMEFF2Q9UIK5 374 aaPredicted RBP8.85□□□□□ -0.99
COL4A6-208ENST00000538570 RBFOX3A6NFN3 312 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 ISLRO14498 428 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 GABRA1P14867 456 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 BCL3P20749 454 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 CA6P23280 308 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 LSM11P83369 360 aaKnown RBP eCLIP8.84□□□□□ -0.99
COL4A6-208ENST00000538570 C10orf126Q8N4M7 172 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 OR1L3Q8NH93 324 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 MANBALQ9NQG1 85 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 ZMIZ1Q9ULJ6 1067 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 URB1O60287 2271 aaKnown RBP8.84□□□□□ -0.99
COL4A6-208ENST00000538570 CA2P00918 260 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 ZXDAP98168 799 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 ZNF117Q03924 483 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 TCTN1Q2MV58 587 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 LGALSLQ3ZCW2 172 aaPredicted RBP8.84□□□□□ -0.99
COL4A6-208ENST00000538570 FDX2Q6P4F2 183 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 RNF2Q99496 336 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 HSD17B10Q99714 261 aaKnown RBP8.84□□□□□ -0.99
COL4A6-208ENST00000538570 GGACTQ9BVM4 153 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 FAM206AQ9NX38 181 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 KCNK7Q9Y2U2 307 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 MTCH2Q9Y6C9 303 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 B4DEV8 164 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 DNASE2O00115 360 aaPredicted RBP8.84□□□□□ -0.99
COL4A6-208ENST00000538570 SIGLEC5O15389 551 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 GCGP01275 180 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 DLK1P80370 383 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 TMEM116Q8NCL8 245 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 C4orf45Q96LM5 186 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 NAT8Q9UHE5 227 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 N4BP2Q86UW6 1770 aaPredicted RBP8.84□□□□□ -0.99
COL4A6-208ENST00000538570 DIRC3C9JPN6 131 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 IGF2P01344 180 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 OR5AC1P0C628 307 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 OR3A4PP47883 348 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 LIAT1Q6ZQX7 453 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 SH2D5Q6ZV89 423 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 DNAJC4Q9NNZ3 241 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 AP5S1Q9NUS5 200 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 IL36GQ9NZH8 169 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 OOEPA6NGQ2 149 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 FGF8P55075 233 aaPredicted RBP8.84□□□□□ -0.99
COL4A6-208ENST00000538570 RBM11P57052 281 aaKnown RBP8.84□□□□□ -0.99
COL4A6-208ENST00000538570 PNRC1Q12796 327 aaPredicted RBP8.84□□□□□ -0.99
COL4A6-208ENST00000538570 HLA-DRB5Q30154 266 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 OR1L1Q8NH94 360 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 DERL1Q9BUN8 251 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 THYN1Q9P016 225 aa8.84□□□□□ -0.99
COL4A6-208ENST00000538570 FMODQ06828 376 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 SURF2Q15527 256 aaPredicted RBP8.83□□□□□ -1
COL4A6-208ENST00000538570 UBE2V2Q15819 145 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 SPINK9Q5DT21 86 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 ALX4Q9H161 411 aaPredicted RBP8.83□□□□□ -1
COL4A6-208ENST00000538570 SLC7A10Q9NS82 523 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 FBXL17Q9UF56 701 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 OPN4Q9UHM6 478 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 FUT9Q9Y231 359 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 SDK1Q7Z5N4 2213 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 A0A1B0GTL3 188 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 PQLC2LA1A4F0 135 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 OR2W5A6NFC9 320 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 IFITM10A6NMD0 228 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 NKX2-2O95096 273 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 CAMPP49913 170 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms