RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 MMP23AO75900 390 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 CALCBP10092 127 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ZNF20P17024 532 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ATF1P18846 271 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 OR3A1P47881 315 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 P2RX3P56373 397 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 CDC42P60953 191 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ZNF85Q03923 595 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 OR52W1Q6IF63 320 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 LHFPL2Q6ZUX7 228 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 UTS2BQ765I0 119 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 OR5AU1Q8NGC0 362 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 OR4P4Q8NGL7 312 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 OCSTAMPQ9BR26 566 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 GAL3ST2Q9H3Q3 398 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 COL7A1Q02388 2944 aa15.78■□□□□ 0.12
TNFRSF1B-204ENST00000536782 H3BNX3 289 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 SIRPB1O00241 398 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 SH2D1BO14796 132 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 OCM2P0CE71 109 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 OCMP0CE72 109 aaPredicted RBP15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 BRS3P32247 399 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 LOXL3P58215 753 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 PDZK1IP1Q13113 114 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 C16orf82Q7Z2V1 217 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 RTN4RL2Q86UN3 420 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ABHD12Q8N2K0 398 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 OR2G2Q8NGZ5 317 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 RNF166Q96A37 237 aaPredicted RBP15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 PHF21AQ96BD5 680 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 SPSB1Q96BD6 273 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 FGGYQ96C11 551 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 AKR1E2Q96JD6 320 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 HMG20AQ9NP66 347 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 EXOSC4Q9NPD3 245 aaKnown RBP15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 DPM3Q9P2X0 92 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 GSTK1Q9Y2Q3 226 aa15.77■□□□□ 0.12
TNFRSF1B-204ENST00000536782 TRGV10A0A0A0MS01 117 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 FUOMA2VDF0 154 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 SAC3D1A6NKF1 404 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 ISG15P05161 165 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 ARHGDIBP52566 201 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 CD83Q01151 205 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 PRAMEF5Q5TYX0 476 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 KCTD20Q7Z5Y7 419 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 ZNF596Q8TC21 504 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 CAPSLQ8WWF8 208 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 STMN2Q93045 179 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 OPALINQ96PE5 141 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 LIN7BQ9HAP6 207 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 FRRS1LQ9P0K9 344 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 PCDHGB5Q9Y5G0 923 aa15.76■□□□□ 0.11
TNFRSF1B-204ENST00000536782 A0A1W2PRX2 142 aa15.75■□□□□ 0.11
TNFRSF1B-204ENST00000536782 OR2H2O95918 312 aa15.75■□□□□ 0.11
TNFRSF1B-204ENST00000536782 CD33P20138 364 aa15.75■□□□□ 0.11
TNFRSF1B-204ENST00000536782 CDK2P24941 298 aa15.75■□□□□ 0.11
TNFRSF1B-204ENST00000536782 BDH1Q02338 343 aa15.75■□□□□ 0.11
TNFRSF1B-204ENST00000536782 HEPN1Q6WQI6 88 aa15.75■□□□□ 0.11
TNFRSF1B-204ENST00000536782 CENPVQ7Z7K6 275 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1B-204ENST00000536782 MBOAT4Q96T53 435 aa15.75■□□□□ 0.11
TNFRSF1B-204ENST00000536782 AURKAIP1Q9NWT8 199 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1B-204ENST00000536782 TAS2R3Q9NYW6 316 aa15.75■□□□□ 0.11
TNFRSF1B-204ENST00000536782 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1B-204ENST00000536782 ZNF281Q9Y2X9 895 aa15.75■□□□□ 0.11
TNFRSF1B-204ENST00000536782 DAPL1A0PJW8 107 aa15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 LEUTXA8MZ59 168 aa15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 ALX3O95076 343 aa15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 CD24P25063 80 aa15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 LMO1P25800 156 aa15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 NANOS3P60323 173 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 AESQ08117 197 aa15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 FDX2Q6P4F2 183 aa15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 BAIAP2L2Q6UXY1 529 aa15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 WFDC9Q8NEX5 89 aa15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 TRUB1Q8WWH5 349 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 CORO2AQ92828 525 aa15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 RFT1Q96AA3 541 aa15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 IMPAD1Q9NX62 359 aa15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 HHLA2Q9UM44 414 aa15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 KMT2CQ8NEZ4 4911 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1B-204ENST00000536782 IGKV1-12A0A0C4DH73 117 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 KDM4BO94953 1096 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 IGKV1D-12P01611 117 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 IGLV1-47P01700 117 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 ALPLP05186 524 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 HTR1AP08908 422 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 PF4V1P10720 104 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 GLIPR1P48060 266 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 CCR9P51686 369 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 FOXB2Q5VYV0 432 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 CREB3L1Q96BA8 519 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 RNFT2Q96EX2 444 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 SLC25A33Q9BSK2 321 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 COMMD4Q9H0A8 199 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 RHOFQ9HBH0 211 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 S100A14Q9HCY8 104 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 ORC6Q9Y5N6 252 aa15.73■□□□□ 0.11
TNFRSF1B-204ENST00000536782 TCRBV4S1A1TA0A5B7 111 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 FAM172BPA6NC97 362 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 TOR1AO14656 332 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms