RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SLC25A40Q8TBP6 338 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 TMEM231Q9H6L2 316 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 NGFRP08138 427 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 MESP2Q0VG99 397 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 TNXAQ16473 311 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 FAM214BQ7L5A3 538 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 MRM2Q9UI43 246 aaKnown RBP14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 RGPD4Q7Z3J3 1758 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 C3orf85A0A1B0GTC6 90 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 ATXN7O15265 892 aaPredicted RBP14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 ETV3LQ6ZN32 361 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 TGIF2LYQ8IUE0 185 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 TGIF2LXQ8IUE1 241 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 OR5A2Q8NGI9 324 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 TNFRSF19Q9NS68 423 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 K7ESF4 209 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 CTAG2O75638 210 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 ZNF528Q3MIS6 628 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 CCDC144NLQ6NUI1 221 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 MUC20Q8N307 709 aaPredicted RBP14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 PRR33A8MZF0 331 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 TMEM251Q8N6I4 163 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 OR8D4Q8NGM9 314 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 ZNF586Q9NXT0 402 aa14.31□□□□□ -0.12
PCDHA3-201ENST00000522353 ZNF260Q3ZCT1 412 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 GLCCI1Q86VQ1 547 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 SLC45A2Q9UMX9 530 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 SFT2D2O95562 160 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 SPP1P10451 314 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 FCARP24071 287 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 MPV17LQ2QL34 196 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 ZBTB37Q5TC79 503 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 LRRTM1Q86UE6 522 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 NECAP1Q8NC96 275 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 WDR61Q9GZS3 305 aaKnown RBP14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 IGHV1-45A0A0A0MS14 117 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 CST4P01036 141 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 BGLAPP02818 100 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 XAF1Q6GPH4 301 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 NAA60Q9H7X0 242 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 SLC52A3Q9NQ40 469 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 OR5R1Q8NH85 324 aa14.3□□□□□ -0.12
PCDHA3-201ENST00000522353 WNT1P04628 370 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 NTF3P20783 257 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 SLC38A11Q08AI6 406 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 FABP9Q0Z7S8 132 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 FAM219BQ5XKK7 198 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 ZAR1Q86SH2 424 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 DOLPP1Q86YN1 238 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 CACNG5Q9UF02 275 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 INSIG2Q9Y5U4 225 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 HYAL3O43820 417 aaPredicted RBP14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 RHOBP62745 196 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 WDR13Q9H1Z4 485 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 MS4A18H0YCH9 400 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 FAM3AP98173 230 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 MS4A18Q3C1V0 323 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 FNDC7Q5VTL7 733 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 MDP1Q86V88 176 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 OR1L4Q8NGR5 311 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 GPR27Q9NS67 375 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 SHANK3Q9BYB0 1731 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 PPIAL4EA0A075B759 164 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 TRDCB7Z8K6 153 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 PPIAL4DF5H284 164 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 SEMA7AO75326 666 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 C1QAP02745 245 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 PPIAL4FP0DN26 164 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 CSRP2Q16527 193 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 FAM181AQ8N9Y4 354 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 NEURL2Q9BR09 285 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 PPIAL4AQ9Y536 164 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 COL24A1Q17RW2 1714 aa14.29□□□□□ -0.12
PCDHA3-201ENST00000522353 SLC31A2O15432 143 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 PLPPR5Q32ZL2 321 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 ZNF788Q6ZQV5 615 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 ANGPTL4Q9BY76 406 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 COA4Q9NYJ1 87 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 TRIP12Q14669 1992 aaPredicted RBP14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 PAX5Q02548 391 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 EIF4EBP2Q13542 120 aaPredicted RBP14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 SSX1Q16384 188 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 PLAC9Q5JTB6 97 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 SIGLECL1Q8N7X8 197 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 A0A0J9YW62 118 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 TIAL1Q01085 375 aaKnown RBP eCLIP14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 SLC16A12Q6ZSM3 486 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 NPTNQ9Y639 398 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 GABRA6Q16445 453 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 TMEM52Q8NDY8 209 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 RNF133Q8WVZ7 376 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 TREM2Q9NZC2 230 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 PRSS12P56730 875 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 PJVKQ0ZLH3 352 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 TSPO2Q5TGU0 170 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 PECRQ9BY49 303 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 PRDM6Q9NQX0 595 aa14.28□□□□□ -0.12
PCDHA3-201ENST00000522353 IGHA1P01876 353 aa14.27□□□□□ -0.12
PCDHA3-201ENST00000522353 DHRS2Q13268 280 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms