RNA–Protein interactions for RNA: ENST00000509638.5

LIMCH1-211, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-211ENST00000509638 OR2H2O95918 312 aa24.61■■□□□ 1.53
LIMCH1-211ENST00000509638 INHBBP09529 407 aa24.61■■□□□ 1.53
LIMCH1-211ENST00000509638 ZNF44P15621 663 aa24.61■■□□□ 1.53
LIMCH1-211ENST00000509638 TMBIM6P55061 237 aa24.61■■□□□ 1.53
LIMCH1-211ENST00000509638 SCN1BQ07699 218 aa24.61■■□□□ 1.53
LIMCH1-211ENST00000509638 BLMHQ13867 455 aa24.61■■□□□ 1.53
LIMCH1-211ENST00000509638 PDCD1Q15116 288 aa24.61■■□□□ 1.53
LIMCH1-211ENST00000509638 WDR25Q64LD2 544 aaPredicted RBP24.61■■□□□ 1.53
LIMCH1-211ENST00000509638 KCNG3Q8TAE7 436 aa24.61■■□□□ 1.53
LIMCH1-211ENST00000509638 ST8SIA4Q92187 359 aa24.61■■□□□ 1.53
LIMCH1-211ENST00000509638 C1orf159Q96HA4 380 aa24.61■■□□□ 1.53
LIMCH1-211ENST00000509638 TMEM59Q9BXS4 323 aa24.61■■□□□ 1.53
LIMCH1-211ENST00000509638 TMEM14DPA8MWL7 114 aa24.6■■□□□ 1.53
LIMCH1-211ENST00000509638 GEMIN2O14893 280 aaKnown RBP24.6■■□□□ 1.53
LIMCH1-211ENST00000509638 NDUFB3O43676 98 aa24.6■■□□□ 1.53
LIMCH1-211ENST00000509638 CHRM2P08172 466 aa24.6■■□□□ 1.53
LIMCH1-211ENST00000509638 GZMKP49863 264 aa24.6■■□□□ 1.53
LIMCH1-211ENST00000509638 NPY4RP50391 375 aa24.6■■□□□ 1.53
LIMCH1-211ENST00000509638 LCN2P80188 198 aa24.6■■□□□ 1.53
LIMCH1-211ENST00000509638 LRRC10Q5BKY1 277 aa24.6■■□□□ 1.53
LIMCH1-211ENST00000509638 MSI2Q96DH6 328 aaKnown RBP24.6■■□□□ 1.53
LIMCH1-211ENST00000509638 SEBOXQ9HB31 216 aaPredicted RBP24.6■■□□□ 1.53
LIMCH1-211ENST00000509638 SLC25A10Q9UBX3 287 aaPredicted RBP24.6■■□□□ 1.53
LIMCH1-211ENST00000509638 KIAA1324LA8MWY0 1029 aaPredicted RBP24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 A8MXK9 166 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 ZFP36P26651 326 aaKnown RBP24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 RANBP1P43487 201 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 Q6P435 159 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 USP43Q70EL4 1123 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 OR2W3Q7Z3T1 314 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 LINC00596Q86U02 117 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 ISOC1Q96CN7 298 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 Q96M66 194 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 BCL7BQ9BQE9 202 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 DCSTAMPQ9H295 470 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 ZNF581Q9P0T4 197 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 WNK2Q9Y3S1 2297 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 B4DSR2 109 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 ZNF737O75373 536 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 OR7C1O76099 320 aaPredicted RBP24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 ZNF16P17020 682 aaPredicted RBP24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 GABRR1P24046 479 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 TAF9Q16594 264 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 C2orf76Q3KRA6 126 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 LINC01356Q8N9X3 169 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 SLC25A46Q96AG3 418 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 CEPT1Q9Y6K0 416 aa24.59■■□□□ 1.53
LIMCH1-211ENST00000509638 DEGS1O15121 323 aa24.58■■□□□ 1.52
LIMCH1-211ENST00000509638 FOXH1O75593 365 aa24.58■■□□□ 1.52
LIMCH1-211ENST00000509638 MSMBP08118 114 aa24.58■■□□□ 1.52
LIMCH1-211ENST00000509638 IDNKQ5T6J7 187 aa24.58■■□□□ 1.52
LIMCH1-211ENST00000509638 METAP1DQ6UB28 335 aaPredicted RBP24.58■■□□□ 1.52
LIMCH1-211ENST00000509638 TMEM272A0A1B0GTI8 110 aa24.57■■□□□ 1.52
LIMCH1-211ENST00000509638 TMEM82A0PJX8 343 aa24.57■■□□□ 1.52
LIMCH1-211ENST00000509638 SLC33A1O00400 549 aaPredicted RBP24.57■■□□□ 1.52
LIMCH1-211ENST00000509638 PSPNO60542 156 aa24.57■■□□□ 1.52
LIMCH1-211ENST00000509638 TK1P04183 234 aa24.57■■□□□ 1.52
LIMCH1-211ENST00000509638 NDUFB7P17568 137 aa24.57■■□□□ 1.52
LIMCH1-211ENST00000509638 RPS27AP62979 156 aaKnown RBP24.57■■□□□ 1.52
LIMCH1-211ENST00000509638 MPV17LQ2QL34 196 aa24.57■■□□□ 1.52
LIMCH1-211ENST00000509638 C17orf107Q6ZR85 190 aa24.57■■□□□ 1.52
LIMCH1-211ENST00000509638 CHST4Q8NCG5 386 aa24.57■■□□□ 1.52
LIMCH1-211ENST00000509638 CHST6Q9GZX3 395 aa24.57■■□□□ 1.52
LIMCH1-211ENST00000509638 RBM38Q9H0Z9 239 aaKnown RBP24.57■■□□□ 1.52
LIMCH1-211ENST00000509638 FBLN5Q9UBX5 448 aa24.57■■□□□ 1.52
LIMCH1-211ENST00000509638 OR5V1Q9UGF6 321 aa24.57■■□□□ 1.52
LIMCH1-211ENST00000509638 CCDC160A6NGH7 325 aa24.56■■□□□ 1.52
LIMCH1-211ENST00000509638 H3BMQ9 156 aa24.56■■□□□ 1.52
LIMCH1-211ENST00000509638 K7N7A8 449 aa24.56■■□□□ 1.52
LIMCH1-211ENST00000509638 HSPB6O14558 160 aa24.56■■□□□ 1.52
LIMCH1-211ENST00000509638 LDLRAD4O15165 306 aa24.56■■□□□ 1.52
LIMCH1-211ENST00000509638 KRTAP1-1Q07627 177 aa24.56■■□□□ 1.52
LIMCH1-211ENST00000509638 PLA2G7Q13093 441 aa24.56■■□□□ 1.52
LIMCH1-211ENST00000509638 SPCS2Q15005 226 aa24.56■■□□□ 1.52
LIMCH1-211ENST00000509638 CROCCP3Q8IVE0 287 aa24.56■■□□□ 1.52
LIMCH1-211ENST00000509638 FAM234AQ9H0X4 552 aa24.56■■□□□ 1.52
LIMCH1-211ENST00000509638 SNRPBP14678 240 aaKnown RBP24.55■■□□□ 1.52
LIMCH1-211ENST00000509638 FOSL1P15407 271 aa24.55■■□□□ 1.52
LIMCH1-211ENST00000509638 CYB5R2Q6BCY4 276 aa24.55■■□□□ 1.52
LIMCH1-211ENST00000509638 OR8H2Q8N162 312 aa24.55■■□□□ 1.52
LIMCH1-211ENST00000509638 LGALS14Q8TCE9 139 aa24.55■■□□□ 1.52
LIMCH1-211ENST00000509638 SNX22Q96L94 193 aa24.55■■□□□ 1.52
LIMCH1-211ENST00000509638 PPA2Q9H2U2 334 aa24.55■■□□□ 1.52
LIMCH1-211ENST00000509638 IFT22Q9H7X7 185 aa24.55■■□□□ 1.52
LIMCH1-211ENST00000509638 SVEP1Q4LDE5 3571 aa24.55■■□□□ 1.52
LIMCH1-211ENST00000509638 TRAV24A0A0B4J272 114 aa24.54■■□□□ 1.52
LIMCH1-211ENST00000509638 PAHP00439 452 aa24.54■■□□□ 1.52
LIMCH1-211ENST00000509638 LMO1P25800 156 aa24.54■■□□□ 1.52
LIMCH1-211ENST00000509638 OR3A1P47881 315 aa24.54■■□□□ 1.52
LIMCH1-211ENST00000509638 GRK1Q15835 563 aa24.54■■□□□ 1.52
LIMCH1-211ENST00000509638 H1FXQ92522 213 aaKnown RBP24.54■■□□□ 1.52
LIMCH1-211ENST00000509638 SMR3AQ99954 134 aa24.54■■□□□ 1.52
LIMCH1-211ENST00000509638 NICN1Q9BSH3 213 aa24.54■■□□□ 1.52
LIMCH1-211ENST00000509638 BARHL1Q9BZE3 327 aa24.54■■□□□ 1.52
LIMCH1-211ENST00000509638 DSCAML1Q8TD84 2053 aa24.54■■□□□ 1.52
LIMCH1-211ENST00000509638 C22orf46C9J442 243 aa24.54■■□□□ 1.52
LIMCH1-211ENST00000509638 PAN3Q58A45 887 aaKnown RBP24.54■■□□□ 1.52
LIMCH1-211ENST00000509638 OR4S1Q8NGB4 309 aa24.54■■□□□ 1.52
LIMCH1-211ENST00000509638 TM2D1Q9BX74 207 aa24.54■■□□□ 1.52
LIMCH1-211ENST00000509638 SHARPINQ9H0F6 387 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms