RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ZNF737O75373 536 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 CDRT1O95170 752 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 OR2H2O95918 312 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 GTF2F2P13984 249 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 ZNF44P15621 663 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 ADRA2CP18825 462 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 LMO1P25800 156 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 DUSP1P28562 367 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 BPIFB3P59826 476 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 FABP5Q01469 135 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 SSX1Q16384 188 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 FAM27D1Q5T7N8 215 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 AWAT2Q6E213 333 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 TMEM91Q6ZNR0 172 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 C1orf122Q6ZSJ8 110 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 LINC00596Q86U02 117 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 OSR2Q8N2R0 312 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 OR51T1Q8NGJ9 327 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 MUL1Q969V5 352 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 MRPS24Q96EL2 167 aaKnown RBP12.38□□□□□ -0.43
RNF4-210ENST00000508235 PCGF1Q9BSM1 259 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 SIRPDQ9H106 197 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 ONECUT1Q9UBC0 465 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 NUP50Q9UKX7 468 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 A0A087WXM4 84 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 TRDV1A0A1B0GX56 115 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 hCG_1809904A0A1W2PP81 198 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 A0A1W2PPE2 198 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 A0A1W2PR64 198 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 A0A1W2PRV1 198 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 FUOMA2VDF0 154 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 M0R1W7 72 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 MGST3O14880 152 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 FSHBP01225 129 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 UBBP0CG47 229 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 SERPINA2P20848 420 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 EPHA1P21709 976 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 FPR2P25090 351 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 CALRP27797 417 aaKnown RBP12.37□□□□□ -0.43
RNF4-210ENST00000508235 PSMD7P51665 324 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 GP2P55259 537 aaKnown RBP12.37□□□□□ -0.43
RNF4-210ENST00000508235 ARF6P62330 175 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 SCN1BQ07699 218 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 GRK1Q15835 563 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 SLC22A6Q4U2R8 563 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 NHLRC3Q5JS37 347 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 GPR157Q5UAW9 335 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 CD200R1LQ6Q8B3 271 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 GLIPR1L1Q6UWM5 242 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 C17orf107Q6ZR85 190 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 LRRTM1Q86UE6 522 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 FAM185AQ8N0U4 392 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 TSPAN14Q8NG11 270 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 OR10K1Q8NGX5 313 aa12.37□□□□□ -0.43
RNF4-210ENST00000508235 NR1H4Q96RI1 486 aaPredicted RBP12.37□□□□□ -0.43
RNF4-210ENST00000508235 TRAV40A0A0B4J280 105 aa12.36□□□□□ -0.43
RNF4-210ENST00000508235 TMEM82A0PJX8 343 aa12.36□□□□□ -0.43
RNF4-210ENST00000508235 SIRPB1O00241 398 aa12.36□□□□□ -0.43
RNF4-210ENST00000508235 PSPNO60542 156 aa12.36□□□□□ -0.43
RNF4-210ENST00000508235 CSN2P05814 226 aa12.36□□□□□ -0.43
RNF4-210ENST00000508235 MMP9P14780 707 aa12.36□□□□□ -0.43
RNF4-210ENST00000508235 MYL9P24844 172 aa12.36□□□□□ -0.43
RNF4-210ENST00000508235 ERP29P30040 261 aaKnown RBP12.36□□□□□ -0.43
RNF4-210ENST00000508235 EDDM3BP56851 147 aa12.36□□□□□ -0.43
RNF4-210ENST00000508235 RBM11P57052 281 aaKnown RBP12.36□□□□□ -0.43
RNF4-210ENST00000508235 MEF2CQ06413 473 aaPredicted RBP12.36□□□□□ -0.43
RNF4-210ENST00000508235 MPV17LQ2QL34 196 aa12.36□□□□□ -0.43
RNF4-210ENST00000508235 SYT6Q5T7P8 510 aaPredicted RBP12.36□□□□□ -0.43
RNF4-210ENST00000508235 LYPD6Q86Y78 171 aa12.36□□□□□ -0.43
RNF4-210ENST00000508235 OR4D6Q8NGJ1 314 aa12.36□□□□□ -0.43
RNF4-210ENST00000508235 NKX3-1Q99801 234 aaPredicted RBP12.36□□□□□ -0.43
RNF4-210ENST00000508235 PPIL3Q9H2H8 161 aaKnown RBP12.36□□□□□ -0.43
RNF4-210ENST00000508235 ZNF696Q9H7X3 374 aa12.36□□□□□ -0.43
RNF4-210ENST00000508235 METTL8Q9H825 291 aaKnown RBP12.36□□□□□ -0.43
RNF4-210ENST00000508235 C19orf12Q9NSK7 152 aa12.36□□□□□ -0.43
RNF4-210ENST00000508235 ST3GAL6Q9Y274 331 aa12.36□□□□□ -0.43
RNF4-210ENST00000508235 DSCAML1Q8TD84 2053 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 A0A0G2JK05 382 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 hADV38S2A0JD32 116 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 H3BUI4 141 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 PDCD5O14737 125 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 OR3A1P47881 315 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 GUCA2AQ02747 115 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 EDDM3AQ14507 147 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 NEDD8Q15843 81 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 C1orf100Q5SVJ3 147 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 NCR3LG1Q68D85 454 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 TMEM200BQ69YZ2 307 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 Q6P435 159 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 METAP1DQ6UB28 335 aaPredicted RBP12.35□□□□□ -0.43
RNF4-210ENST00000508235 VMO1Q7Z5L0 202 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 BPIFB2Q8N4F0 458 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 OR4S1Q8NGB4 309 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 OR4M1Q8NGD0 313 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 TBX15Q96SF7 602 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 MS4A7Q9GZW8 240 aaPredicted RBP12.35□□□□□ -0.43
RNF4-210ENST00000508235 CHST6Q9GZX3 395 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 CST11Q9H112 138 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 OCEL1Q9H607 264 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 IFT22Q9H7X7 185 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms