RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 AIPO00170 330 aa11.98□□□□□ -0.49
USP11-212ENST00000497179 SH2D1BO14796 132 aa11.98□□□□□ -0.49
USP11-212ENST00000497179 GABARAPO95166 117 aa11.98□□□□□ -0.49
USP11-212ENST00000497179 ECDO95905 644 aaPredicted RBP11.98□□□□□ -0.49
USP11-212ENST00000497179 OR2H2O95918 312 aa11.98□□□□□ -0.49
USP11-212ENST00000497179 VSIG8P0DPA2 414 aa11.98□□□□□ -0.49
USP11-212ENST00000497179 MGMTP16455 207 aa11.98□□□□□ -0.49
USP11-212ENST00000497179 QRFPP83859 136 aa11.98□□□□□ -0.49
USP11-212ENST00000497179 P2RY14Q15391 338 aa11.98□□□□□ -0.49
USP11-212ENST00000497179 CD276Q5ZPR3 534 aa11.98□□□□□ -0.49
USP11-212ENST00000497179 ASCC1Q8N9N2 400 aaKnown RBP11.98□□□□□ -0.49
USP11-212ENST00000497179 CHST4Q8NCG5 386 aa11.98□□□□□ -0.49
USP11-212ENST00000497179 GSX1Q9H4S2 264 aaPredicted RBP11.98□□□□□ -0.49
USP11-212ENST00000497179 IFT22Q9H7X7 185 aa11.98□□□□□ -0.49
USP11-212ENST00000497179 HIF1ANQ9NWT6 349 aa11.98□□□□□ -0.49
USP11-212ENST00000497179 STEAP1Q9UHE8 339 aa11.98□□□□□ -0.49
USP11-212ENST00000497179 LOC105371242A0A075B767 164 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 IGHV2-70DA0A0C4DH43 119 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 SMIM30A4D0T7 59 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 TMEM14DPA8MWL7 114 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 SIRPB1O00241 398 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 CRTAPO75718 401 aaPredicted RBP11.97□□□□□ -0.49
USP11-212ENST00000497179 TK1P04183 234 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 CLEC2LP0C7M8 214 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 ZNF44P15621 663 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 ARSBP15848 533 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 GATA3P23771 443 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 LMO1P25800 156 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 TGFBR1P36897 503 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 CLDN12P56749 244 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 LSM3P62310 102 aaKnown RBP11.97□□□□□ -0.49
USP11-212ENST00000497179 MXD1Q05195 221 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 UNC119Q13432 240 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 MPV17LQ2QL34 196 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 HES5Q5TA89 166 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 GPR107Q5VW38 600 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 C17orf107Q6ZR85 190 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 BTN2A1Q7KYR7 527 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 OR2W3Q7Z3T1 314 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 OR8H2Q8N162 312 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 KCNG3Q8TAE7 436 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 SNX22Q96L94 193 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 Q96M66 194 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 NAA50Q9GZZ1 169 aaKnown RBP11.97□□□□□ -0.49
USP11-212ENST00000497179 KCNK15Q9H427 330 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 BANF2Q9H503 90 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 FBLN5Q9UBX5 448 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 KCNS2Q9ULS6 477 aa11.97□□□□□ -0.49
USP11-212ENST00000497179 ANK3Q12955 4377 aaKnown RBP11.97□□□□□ -0.49
USP11-212ENST00000497179 TEP1Q99973 2627 aaKnown RBP11.96□□□□□ -0.49
USP11-212ENST00000497179 TRBV23-1A0A0A0MS06 115 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM90A10PA6NDY2 464 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM90A18PA6NE21 464 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM90A16PA6NEW6 464 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM90A20PA6NIJ5 464 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM90A8PA6NJQ4 464 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM90A7PA6NKC0 464 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM90A22PA8MWA6 464 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM90A12PA8MX19 464 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM90A5PA8MXJ8 464 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM90A23PA8MXZ1 464 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 SLC33A1O00400 549 aaPredicted RBP11.96□□□□□ -0.49
USP11-212ENST00000497179 GEMIN2O14893 280 aaKnown RBP11.96□□□□□ -0.49
USP11-212ENST00000497179 DEGS1O15121 323 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 ENSAO43768 121 aaKnown RBP11.96□□□□□ -0.49
USP11-212ENST00000497179 PSPNO60542 156 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 MPIG6BO95866 241 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM90A15PP0C7V4 464 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM90A13PP0C7W8 464 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM90A14PP0C7W9 464 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM90A24PP0C7X0 464 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 NDUFB7P17568 137 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 GABRR1P24046 479 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 OR3A1P47881 315 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 NCS1P62166 190 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 RPS27AP62979 156 aaKnown RBP11.96□□□□□ -0.49
USP11-212ENST00000497179 CTF1Q16619 201 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 OR10K2Q6IF99 312 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 SFXN4Q6P4A7 337 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 OR51D1Q8NGF3 324 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 C8orf46Q8TAG6 207 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 RAB40AQ8WXH6 277 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM46BQ96A09 425 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 FAM3DQ96BQ1 224 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 POM121Q96HA1 1249 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 DCTN5Q9BTE1 182 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 TMEM59Q9BXS4 323 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 SELENOIQ9C0D9 397 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 SHARPINQ9H0F6 387 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 MMP26Q9NRE1 261 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 YAE1D1Q9NRH1 226 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 RPUSD1Q9UJJ7 312 aaKnown RBP11.96□□□□□ -0.49
USP11-212ENST00000497179 INSIG2Q9Y5U4 225 aa11.96□□□□□ -0.49
USP11-212ENST00000497179 MTORP42345 2549 aa11.96□□□□□ -0.5
USP11-212ENST00000497179 CSPG4Q6UVK1 2322 aa11.95□□□□□ -0.5
USP11-212ENST00000497179 ABCA1O95477 2261 aa11.95□□□□□ -0.5
USP11-212ENST00000497179 MED13LQ71F56 2210 aa11.95□□□□□ -0.5
USP11-212ENST00000497179 MALRD1Q5VYJ5 2156 aa11.95□□□□□ -0.5
USP11-212ENST00000497179 TRAV24A0A0B4J272 114 aa11.95□□□□□ -0.5
USP11-212ENST00000497179 A0A0G2JMP0 313 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms