RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 P2RY14Q15391 338 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 TRAM1Q15629 374 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 GRK1Q15835 563 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 SYT6Q5T7P8 510 aaPredicted RBP9.19□□□□□ -0.94
APTX-230ENST00000494649 C17orf107Q6ZR85 190 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 SAXO1Q8IYX7 474 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 NKAIN3Q8N8D7 197 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 ZSCAN4Q8NAM6 433 aaPredicted RBP9.19□□□□□ -0.94
APTX-230ENST00000494649 TMEM104Q8NE00 496 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 PXT1Q8NFP0 134 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 OR4S1Q8NGB4 309 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 THRSPQ92748 146 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 DACT3Q96B18 629 aaPredicted RBP9.19□□□□□ -0.94
APTX-230ENST00000494649 MRI1Q9BV20 369 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 DNTTIP1Q9H147 329 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 PLGRKTQ9HBL7 147 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 SIRT7Q9NRC8 400 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 ST3GAL6Q9Y274 331 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 SOX21Q9Y651 276 aaPredicted RBP9.19□□□□□ -0.94
APTX-230ENST00000494649 KIR2DS1A0A191URI9 304 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 SH2D1BO14796 132 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 GEMIN2O14893 280 aaKnown RBP9.18□□□□□ -0.94
APTX-230ENST00000494649 ZNF737O75373 536 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 CRTAPO75718 401 aaPredicted RBP9.18□□□□□ -0.94
APTX-230ENST00000494649 CHRM2P08172 466 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 SMIM18P0DKX4 95 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 SRD5A1P18405 259 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 LSM3P62310 102 aaKnown RBP9.18□□□□□ -0.94
APTX-230ENST00000494649 ZNF146Q15072 292 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 TAF9Q16594 264 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 HES5Q5TA89 166 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 CD276Q5ZPR3 534 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 GLT8D1Q68CQ7 371 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 LYPD6Q86Y78 171 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 DCTN5Q9BTE1 182 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 TXNL4BQ9NX01 149 aaKnown RBP9.18□□□□□ -0.94
APTX-230ENST00000494649 CDC42EP3Q9UKI2 254 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 STUB1Q9UNE7 303 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 POLR3KQ9Y2Y1 108 aaPredicted RBP9.18□□□□□ -0.94
APTX-230ENST00000494649 JMJD1CQ15652 2540 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 MXRA5Q9NR99 2828 aa9.18□□□□□ -0.94
APTX-230ENST00000494649 TRAV40A0A0B4J280 105 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 TRDV1A0A1B0GX56 115 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 A0A1W2PRD5 423 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 A0A1W2PRF3 423 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 A0A1W2PRM7 423 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 K7N7A8 449 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 DEGS1O15121 323 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 OR7C1O76099 320 aaPredicted RBP9.17□□□□□ -0.94
APTX-230ENST00000494649 IGHV4-38-2P0DP08 117 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 CCL3L1P16619 93 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 HNF1AP20823 631 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 MTNR1BP49286 362 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 CAV3P56539 151 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 RPL31P62899 125 aaKnown RBP9.17□□□□□ -0.94
APTX-230ENST00000494649 MXD1Q05195 221 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 AESQ08117 197 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 ZNF273Q14593 569 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 SPIN3Q5JUX0 258 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 CD200R1LQ6Q8B3 271 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 GDPD3Q7L5L3 318 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 OSR2Q8N2R0 312 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 CENPOQ9BU64 300 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 VCX3AQ9NNX9 186 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 GLS2Q9UI32 602 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 A0A0B4J203 849 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 A0A0G2JK05 382 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 SLC33A1O00400 549 aaPredicted RBP9.17□□□□□ -0.94
APTX-230ENST00000494649 TOX4O94842 621 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 HOXB4P17483 251 aaPredicted RBP9.17□□□□□ -0.94
APTX-230ENST00000494649 MYL9P24844 172 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 HTR2CP28335 458 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 OR3A1P47881 315 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 PAX8Q06710 450 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 ATAD3CQ5T2N8 411 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 Q6P435 159 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 BRD3OSQ6XYD6 125 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 NR2C2APQ86WQ0 139 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 OR8H2Q8N162 312 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 C1orf147Q96MC9 270 aaPredicted RBP9.17□□□□□ -0.94
APTX-230ENST00000494649 SELENOIQ9C0D9 397 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 SSR3Q9UNL2 185 aa9.17□□□□□ -0.94
APTX-230ENST00000494649 NAV3Q8IVL0 2385 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 MEGF11A6BM72 1044 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 MPIG6BO95866 241 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 GTF2F2P13984 249 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 MGMTP16455 207 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 GATA3P23771 443 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 RBM11P57052 281 aaKnown RBP9.16□□□□□ -0.94
APTX-230ENST00000494649 KLRD1Q13241 179 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 KLF17Q5JT82 389 aaPredicted RBP9.16□□□□□ -0.94
APTX-230ENST00000494649 METTL11BQ5VVY1 283 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 RUSC1-AS1Q66K80 236 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 TMEM200BQ69YZ2 307 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 ELP2Q6IA86 826 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 ASCL4Q6XD76 172 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 RTN4RL2Q86UN3 420 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 PHYHIPQ92561 330 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 WDFY2Q96P53 400 aa9.16□□□□□ -0.94
APTX-230ENST00000494649 TRAV39A0A0B4J263 110 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms