RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	FAM90A24P	P0C7X0	464 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	VEGFC	P49767	419 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	CCL8	P80075	99 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	PITPNA	Q00169	270 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	LOXL1	Q08397	574 aa	Predicted RBP	15.25	■□□□□ 0.03
SRM-206	ENST00000490101	MOGAT2	Q3SYC2	334 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	MOGAT3	Q86VF5	341 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	IZUMO1	Q8IYV9	350 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	ZCCHC24	Q8N2G6	241 aa	Known RBP	15.25	■□□□□ 0.03
SRM-206	ENST00000490101	OR10R2	Q8NGX6	335 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	C10orf105	Q8TEF2	133 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	ABHD1	Q96SE0	405 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	NICN1	Q9BSH3	213 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	SRR	Q9GZT4	340 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	HES4	Q9HCC6	221 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	GCM1	Q9NP62	436 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	ST3GAL6	Q9Y274	331 aa		15.25	■□□□□ 0.03
SRM-206	ENST00000490101	MRPS7	Q9Y2R9	242 aa	Known RBP	15.25	■□□□□ 0.03
SRM-206	ENST00000490101		J3QRK9	145 aa		15.24	■□□□□ 0.03
SRM-206	ENST00000490101	CTDSPL	O15194	276 aa		15.24	■□□□□ 0.03
SRM-206	ENST00000490101	SOCS1	O15524	211 aa		15.24	■□□□□ 0.03
SRM-206	ENST00000490101	ZNF16	P17020	682 aa	Predicted RBP	15.24	■□□□□ 0.03
SRM-206	ENST00000490101	PRKACA	P17612	351 aa		15.24	■□□□□ 0.03
SRM-206	ENST00000490101	EFNA4	P52798	201 aa		15.24	■□□□□ 0.03
SRM-206	ENST00000490101	TMEM50B	P56557	158 aa		15.24	■□□□□ 0.03
SRM-206	ENST00000490101	MADCAM1	Q13477	382 aa		15.24	■□□□□ 0.03
SRM-206	ENST00000490101	IL13RA2	Q14627	380 aa		15.24	■□□□□ 0.03
SRM-206	ENST00000490101	PIGY	Q3MUY2	71 aa		15.24	■□□□□ 0.03
SRM-206	ENST00000490101	EMG1	Q92979	244 aa	Known RBP	15.24	■□□□□ 0.03
SRM-206	ENST00000490101	BORCS5	Q969J3	196 aa		15.24	■□□□□ 0.03
SRM-206	ENST00000490101	SDHC	Q99643	169 aa	Predicted RBP	15.24	■□□□□ 0.03
SRM-206	ENST00000490101	DECR2	Q9NUI1	292 aa		15.24	■□□□□ 0.03
SRM-206	ENST00000490101	RASL12	Q9NYN1	266 aa		15.24	■□□□□ 0.03
SRM-206	ENST00000490101	hCG_1807616	A0A1W2PRN6	198 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	SRRM5	B3KS81	715 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	IFNL4	K9M1U5	179 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	TPD52L2	O43399	206 aa	Known RBP	15.23	■□□□□ 0.03
SRM-206	ENST00000490101	NXPH2	O95156	264 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	LHB	P01229	141 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	MRPS10	P82664	201 aa	Known RBP	15.23	■□□□□ 0.03
SRM-206	ENST00000490101	CARTPT	Q16568	116 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	TAF9	Q16594	264 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	ZNF181	Q2M3W8	571 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	PYDC2	Q56P42	97 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	LINC00596	Q86U02	117 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	OR11L1	Q8NGX0	322 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	LRRC29	Q8WV35	223 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	RAB3C	Q96E17	227 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	CCDC32	Q9BV29	185 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	AUNIP	Q9H7T9	357 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	SAP30L	Q9HAJ7	183 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	RNF7	Q9UBF6	113 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	PPP1R3C	Q9UQK1	317 aa		15.23	■□□□□ 0.03
SRM-206	ENST00000490101	SVEP1	Q4LDE5	3571 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101		H3BUI4	141 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	GEMIN2	O14893	280 aa	Known RBP	15.22	■□□□□ 0.03
SRM-206	ENST00000490101	MELTF	P08582	738 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	CSF3	P09919	207 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	USF1	P22415	310 aa	Predicted RBP	15.22	■□□□□ 0.03
SRM-206	ENST00000490101	BLVRB	P30043	206 aa	Predicted RBP	15.22	■□□□□ 0.03
SRM-206	ENST00000490101	ARL6IP1	Q15041	203 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	MPV17L	Q2QL34	196 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	ZNF260	Q3ZCT1	412 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	CDNF	Q49AH0	187 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	SIGIRR	Q6IA17	410 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	FAM90A1	Q86YD7	464 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	BATF2	Q8N1L9	274 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	GCSAM	Q8N6F7	178 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	CHST4	Q8NCG5	386 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	ZFAND2B	Q8WV99	257 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	HPS1	Q92902	700 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	BEX2	Q9BXY8	128 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	15.22	■□□□□ 0.03
SRM-206	ENST00000490101	CDC42EP3	Q9UKI2	254 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	HSF4	Q9ULV5	492 aa		15.22	■□□□□ 0.03
SRM-206	ENST00000490101	WNT9B	O14905	357 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	GSTZ1	O43708	216 aa	Predicted RBP	15.21	■□□□□ 0.03
SRM-206	ENST00000490101	F12	P00748	615 aa	Predicted RBP	15.21	■□□□□ 0.03
SRM-206	ENST00000490101	GSTP1	P09211	210 aa	Known RBP	15.21	■□□□□ 0.03
SRM-206	ENST00000490101	FAM157C	P0CG43	387 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	IGHV4-31	P0DP07	118 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	HIST1H1D	P16402	221 aa	Known RBP	15.21	■□□□□ 0.03
SRM-206	ENST00000490101	GLRA1	P23415	457 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	GABRR1	P24046	479 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	CHAT	P28329	748 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	ZNF146	Q15072	292 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	PLAC9	Q5JTB6	97 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	SPIN3	Q5JUX0	258 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	CYB5R2	Q6BCY4	276 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	FIP1L1	Q6UN15	594 aa	Known RBP	15.21	■□□□□ 0.03
SRM-206	ENST00000490101	ACP7	Q6ZNF0	438 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101		Q6ZTK2	550 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	SNX29P2	Q8IUI4	249 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101		Q8N402	240 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	VRK1	Q99986	396 aa	Predicted RBP	15.21	■□□□□ 0.03
SRM-206	ENST00000490101	RAB1B	Q9H0U4	201 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	IFT22	Q9H7X7	185 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	SEBOX	Q9HB31	216 aa	Predicted RBP	15.21	■□□□□ 0.03
SRM-206	ENST00000490101	PALMD	Q9NP74	551 aa		15.21	■□□□□ 0.03
SRM-206	ENST00000490101	IL36RN	Q9UBH0	155 aa		15.21	■□□□□ 0.03

Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms