RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 FAM90A20PA6NIJ5 464 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 FAM90A9PA6NNJ1 464 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 FAM90A12PA8MX19 464 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 FAM90A5PA8MXJ8 464 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 INMTO95050 263 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 CYB5AP00167 134 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 IGHG2P01859 326 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 FAM90A15PP0C7V4 464 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 FAM90A13PP0C7W8 464 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 FAM90A14PP0C7W9 464 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 FAM90A24PP0C7X0 464 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 SLC2A5P22732 501 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 FUT6P51993 359 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 ACTR3P61158 418 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 GINS1Q14691 196 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 KIR2DS1Q14954 304 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 ZNF146Q15072 292 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 DEFB136Q30KP8 78 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 SPATS1Q496A3 300 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 CXorf66Q5JRM2 361 aaPredicted RBP12.66□□□□□ -0.38
DDX56-210ENST00000479440 SPIN3Q5JUX0 258 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 CYP2R1Q6VVX0 501 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 Q6ZSR3 168 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 SBSPONQ8IVN8 264 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 ELMOD2Q8IZ81 293 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 OR56B4Q8NH76 319 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 CORO2AQ92828 525 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 BORCS8Q96FH0 119 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 TEX12Q9BXU0 123 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 GON7Q9BXV9 100 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 ZMAT4Q9H898 229 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 IL36RNQ9UBH0 155 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 OR52A1Q9UKL2 312 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 COPS3Q9UNS2 423 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 R4GMQ9 66 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 A0A087X0M5 115 aa12.65□□□□□ -0.38
DDX56-210ENST00000479440 TRBV2A0A0J9YWF9 115 aa12.65□□□□□ -0.38
DDX56-210ENST00000479440 A0A1B0GTI1 187 aa12.65□□□□□ -0.38
DDX56-210ENST00000479440 A0A1B0GX30 115 aa12.65□□□□□ -0.38
DDX56-210ENST00000479440 PRR32B1ATL7 298 aa12.65□□□□□ -0.38
DDX56-210ENST00000479440 LY6LH3BQJ8 138 aa12.65□□□□□ -0.38
DDX56-210ENST00000479440 SRSF10O75494 262 aaKnown RBP12.65□□□□□ -0.38
DDX56-210ENST00000479440 ZNF260Q3ZCT1 412 aa12.65□□□□□ -0.38
DDX56-210ENST00000479440 LCNL1Q6ZST4 164 aa12.65□□□□□ -0.38
DDX56-210ENST00000479440 DRAM1Q8N682 238 aa12.65□□□□□ -0.38
DDX56-210ENST00000479440 GIPC3Q8TF64 312 aa12.65□□□□□ -0.38
DDX56-210ENST00000479440 FEVQ99581 238 aa12.65□□□□□ -0.38
DDX56-210ENST00000479440 DCLRE1BQ9H816 532 aa12.65□□□□□ -0.38
DDX56-210ENST00000479440 EXOSC4Q9NPD3 245 aaKnown RBP12.65□□□□□ -0.38
DDX56-210ENST00000479440 RBFOX1Q9NWB1 397 aaKnown RBP12.65□□□□□ -0.38
DDX56-210ENST00000479440 ARGLU1Q9NWB6 273 aaPredicted RBP12.65□□□□□ -0.38
DDX56-210ENST00000479440 SCOCQ9UIL1 159 aa12.65□□□□□ -0.38
DDX56-210ENST00000479440 LYSTQ99698 3801 aa12.65□□□□□ -0.38
DDX56-210ENST00000479440 IGKV1-27A0A075B6S5 117 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 AP4M1O00189 453 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 SIRPB1O00241 398 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 ENTPD6O75354 484 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 RPLP1P05386 114 aaKnown RBP12.64□□□□□ -0.39
DDX56-210ENST00000479440 PRKACAP17612 351 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 ATP6V1B2P21281 511 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 CCL1P22362 96 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 DUSP1P28562 367 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 GDNFP39905 211 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 INSL3P51460 131 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 PNLIPRP3Q17RR3 467 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 FAM58AQ8N1B3 248 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 OR9G1Q8NH87 305 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 HRASLS5Q96KN8 279 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 CNN2Q99439 309 aaKnown RBP12.64□□□□□ -0.39
DDX56-210ENST00000479440 NDE1Q9NXR1 346 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 ACTR3BQ9P1U1 418 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 SNX5Q9Y5X3 404 aa12.64□□□□□ -0.39
DDX56-210ENST00000479440 CDX1P47902 265 aaPredicted RBP12.63□□□□□ -0.39
DDX56-210ENST00000479440 RAB7AP51149 207 aa12.63□□□□□ -0.39
DDX56-210ENST00000479440 SNU13P55769 128 aaKnown RBP12.63□□□□□ -0.39
DDX56-210ENST00000479440 FOXE3Q13461 319 aa12.63□□□□□ -0.39
DDX56-210ENST00000479440 UBE2V2Q15819 145 aa12.63□□□□□ -0.39
DDX56-210ENST00000479440 FAM98BQ52LJ0 330 aaKnown RBP12.63□□□□□ -0.39
DDX56-210ENST00000479440 ZFAND6Q6FIF0 208 aa12.63□□□□□ -0.39
DDX56-210ENST00000479440 ZNF322Q6U7Q0 402 aaPredicted RBP12.63□□□□□ -0.39
DDX56-210ENST00000479440 C16orf89Q6UX73 402 aa12.63□□□□□ -0.39
DDX56-210ENST00000479440 C4orf3Q8WVX3 66 aa12.63□□□□□ -0.39
DDX56-210ENST00000479440 CITED4Q96RK1 184 aa12.63□□□□□ -0.39
DDX56-210ENST00000479440 MNTQ99583 582 aa12.63□□□□□ -0.39
DDX56-210ENST00000479440 CHST5Q9GZS9 411 aa12.63□□□□□ -0.39
DDX56-210ENST00000479440 ZNF556Q9HAH1 456 aa12.63□□□□□ -0.39
DDX56-210ENST00000479440 NKX1-2Q9UD57 310 aaPredicted RBP12.63□□□□□ -0.39
DDX56-210ENST00000479440 A0A1W2PPI3 338 aa12.62□□□□□ -0.39
DDX56-210ENST00000479440 ODAMA1E959 279 aa12.62□□□□□ -0.39
DDX56-210ENST00000479440 CCDC182A6NF36 153 aa12.62□□□□□ -0.39
DDX56-210ENST00000479440 ZNF729A6NN14 1252 aaPredicted RBP12.62□□□□□ -0.39
DDX56-210ENST00000479440 SH2D1BO14796 132 aa12.62□□□□□ -0.39
DDX56-210ENST00000479440 RRP9O43818 475 aaKnown RBP12.62□□□□□ -0.39
DDX56-210ENST00000479440 SERPINA3P01011 423 aa12.62□□□□□ -0.39
DDX56-210ENST00000479440 CSN2P05814 226 aa12.62□□□□□ -0.39
DDX56-210ENST00000479440 ELANEP08246 267 aa12.62□□□□□ -0.39
DDX56-210ENST00000479440 OSMP13725 252 aa12.62□□□□□ -0.39
DDX56-210ENST00000479440 BCL3P20749 454 aa12.62□□□□□ -0.39
DDX56-210ENST00000479440 NFYBP25208 207 aa12.62□□□□□ -0.39
DDX56-210ENST00000479440 GLIPR1P48060 266 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms