RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CLDN22Q8N7P3 220 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 GATD1Q8NB37 220 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 ZNRF1Q8ND25 227 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 TMEM161BQ8NDZ6 487 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 OR52E2Q8NGJ4 325 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 OR2T29Q8NH02 315 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 OR10A6Q8NH74 314 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 NT5CQ8TCD5 201 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 TMED6Q8WW62 240 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 ASB13Q8WXK3 278 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 LZICQ8WZA0 190 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 DNAJC19Q96DA6 116 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 SFRP2Q96HF1 295 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 PGLYRP4Q96LB8 373 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 UBE2E2Q96LR5 201 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 MAGEB18Q96M61 343 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 OR2M4Q96R27 311 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 P2RX4Q99571 388 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 HOPXQ9BPY8 73 aaPredicted RBP2.33□□□□□ -2.04
HMGN4-202ENST00000477243 CMSS1Q9BQ75 279 aaKnown RBP2.33□□□□□ -2.04
HMGN4-202ENST00000477243 RIOK2Q9BVS4 552 aaKnown RBP2.33□□□□□ -2.04
HMGN4-202ENST00000477243 MOB1AQ9H8S9 216 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 ISG20L2Q9H9L3 353 aaKnown RBP2.33□□□□□ -2.04
HMGN4-202ENST00000477243 NMNAT1Q9HAN9 279 aaPredicted RBP2.33□□□□□ -2.04
HMGN4-202ENST00000477243 MYOZ1Q9NP98 299 aaPredicted RBP2.33□□□□□ -2.04
HMGN4-202ENST00000477243 IL1RAPQ9NPH3 570 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 KCNJ16Q9NPI9 418 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 SPANXA1Q9NS26 97 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 PARVAQ9NVD7 372 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 CALYQ9NYX4 217 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 TREM2Q9NZC2 230 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 DNAJC27Q9NZQ0 273 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 KLHL21Q9UJP4 597 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.33□□□□□ -2.04
HMGN4-202ENST00000477243 INSL5Q9Y5Q6 135 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 KCNE3Q9Y6H6 103 aa2.33□□□□□ -2.04
HMGN4-202ENST00000477243 DOCK3Q8IZD9 2030 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 IGHV3-20A0A0C4DH32 117 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 A0A0G2JLM5 398 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 OR6C6A6NF89 314 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 SMIM9A6NGZ8 99 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 DHRS7CA6NNS2 312 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 CEACAM18A8MTB9 384 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF705EA8MWA4 302 aaPredicted RBP2.32□□□□□ -2.04
HMGN4-202ENST00000477243 OR11H12B2RN74 326 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 M0QZK8 103 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 PI15O43692 258 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 SMIM24O75264 130 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 CNMDO75829 334 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 NXPH4O95158 308 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 KLF8O95600 359 aaPredicted RBP2.32□□□□□ -2.04
HMGN4-202ENST00000477243 SEMA4FO95754 770 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 SLC25A27O95847 323 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 HAND1O96004 215 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 NGFP01138 241 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 CD5P06127 495 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 MMP7P09237 267 aaPredicted RBP2.32□□□□□ -2.04
HMGN4-202ENST00000477243 NBEAP1P0C6P0 100 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 RBMY1CP0DJD4 496 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 PGA5P0DJD9 388 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 GGT1P19440 569 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 WARSP23381 471 aaKnown RBP2.32□□□□□ -2.04
HMGN4-202ENST00000477243 CRABP1P29762 137 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 ADORA1P30542 326 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 GRPRP30550 384 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 CCR7P32248 378 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 RCVRNP35243 200 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 PMELP40967 661 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 OPRL1P41146 370 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 CDKN2DP55273 166 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 TCL1AP56279 114 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 TMEM33P57088 247 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 AP1S1P61966 158 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 SRPXP78539 464 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 CYCSP99999 105 aaKnown RBP2.32□□□□□ -2.04
HMGN4-202ENST00000477243 FLI1Q01543 452 aaPredicted RBP2.32□□□□□ -2.04
HMGN4-202ENST00000477243 BAXQ07812 192 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 RBMS2Q15434 407 aaKnown RBP2.32□□□□□ -2.04
HMGN4-202ENST00000477243 TGIF1Q15583 401 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 LTB4RQ15722 352 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 ARHGAP11BQ3KRB8 267 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 C14orf28Q4W4Y0 310 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 BRMS1LQ5PSV4 323 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 ANKRD22Q5VYY1 191 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 RUSC1-AS1Q66K80 236 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF324BQ6AW86 544 aaPredicted RBP2.32□□□□□ -2.04
HMGN4-202ENST00000477243 LAMTOR1Q6IAA8 161 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 CNIH2Q6PI25 160 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 SMARCD3Q6STE5 483 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 UGT2A3Q6UWM9 527 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 FAM231DQ6ZW35 169 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 OLIG3Q7RTU3 272 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 TMEM144Q7Z5S9 345 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 PTAR1Q7Z6K3 402 aaPredicted RBP2.32□□□□□ -2.04
HMGN4-202ENST00000477243 DPPA2Q7Z7J5 298 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 S100A7AQ86SG5 101 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 NFE4Q86UQ8 179 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 RDH10Q8IZV5 341 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 SUMF1Q8NBK3 374 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 TMEM178AQ8NBL3 297 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms