RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ISL1P61371 349 aa11.78□□□□□ -0.52
SMG5-204ENST00000476954 TSPAN31Q12999 210 aa11.78□□□□□ -0.52
SMG5-204ENST00000476954 IL24Q13007 206 aa11.78□□□□□ -0.52
SMG5-204ENST00000476954 KPNB1Q14974 876 aaKnown RBP11.78□□□□□ -0.52
SMG5-204ENST00000476954 SLC15A3Q8IY34 581 aa11.78□□□□□ -0.52
SMG5-204ENST00000476954 FAM162AQ96A26 154 aa11.78□□□□□ -0.52
SMG5-204ENST00000476954 TMED9Q9BVK6 235 aa11.78□□□□□ -0.52
SMG5-204ENST00000476954 CADM1Q9BY67 442 aaKnown RBP11.78□□□□□ -0.52
SMG5-204ENST00000476954 A0A0U1RQV5 110 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 SIRPB1O00241 398 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 HSPA12AO43301 675 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 RRP9O43818 475 aaKnown RBP11.77□□□□□ -0.53
SMG5-204ENST00000476954 NPPAP01160 153 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 IGLV3-1P01715 115 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 LYNP07948 512 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 ERP29P30040 261 aaKnown RBP11.77□□□□□ -0.53
SMG5-204ENST00000476954 ZNF91Q05481 1191 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 PMS2P11Q13670 270 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 C17orf58Q2M2W7 97 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 COQ5Q5HYK3 327 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 SLX4IPQ5VYV7 408 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 TMEM42Q69YG0 159 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 SHFQ7M4L6 423 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 Q8N6K4 173 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 OR9G1Q8NH87 305 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 OTOSQ8NHW6 89 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 GNPDA2Q8TDQ7 276 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 CORO2AQ92828 525 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 TLCD1Q96CP7 247 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 OR4C12Q96R67 309 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 PKIBQ9C010 78 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 GHITMQ9H3K2 345 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 PCDHB16Q9NRJ7 776 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 PLSCR3Q9NRY6 295 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 FAM206AQ9NX38 181 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 ING3Q9NXR8 418 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.77□□□□□ -0.53
SMG5-204ENST00000476954 V9GYY5 206 aaPredicted RBP11.77□□□□□ -0.53
SMG5-204ENST00000476954 VPS13DQ5THJ4 4388 aa11.77□□□□□ -0.53
SMG5-204ENST00000476954 IGKV1-27A0A075B6S5 117 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 IGHV4OR15-8A0A075B7B6 117 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 A0A087WW49 117 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 FAM230AA0A1W2PPH8 454 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 OR8U9P0C7N5 309 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 BLVRAP53004 296 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 AESQ08117 197 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 EBI3Q14213 229 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 CLVS2Q5SYC1 327 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 WDR93Q6P2C0 686 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 EMG1Q92979 244 aaKnown RBP11.76□□□□□ -0.53
SMG5-204ENST00000476954 TAS2R3Q9NYW6 316 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 ACTR3BQ9P1U1 418 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 DNAJB9Q9UBS3 223 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 WSB1Q9Y6I7 421 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 V9GYQ6 96 aa11.76□□□□□ -0.53
SMG5-204ENST00000476954 G3V318 75 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 J3QR06 171 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 NME4O00746 187 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 IGLV1-51P01701 117 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 ATP6V1B1P15313 513 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 PTGFRP43088 359 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 REG1BP48304 166 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 HCCSP53701 268 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 ZP1P60852 638 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 PITPNAQ00169 270 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 KLF10Q13118 480 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 TMEM65Q6PI78 240 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 OR4D6Q8NGJ1 314 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 STON2Q8WXE9 905 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 OTULINQ96BN8 352 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 KIRREL1Q96J84 757 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 TSSK6Q9BXA6 273 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 PBOV1Q9GZY1 135 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 OR51J1Q9H342 316 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 TUBA4BQ9H853 241 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 TPSG1Q9NRR2 321 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 RBFOX1Q9NWB1 397 aaKnown RBP11.75□□□□□ -0.53
SMG5-204ENST00000476954 IL20Q9NYY1 176 aa11.75□□□□□ -0.53
SMG5-204ENST00000476954 AMMECR1Q9Y4X0 333 aaPredicted RBP11.75□□□□□ -0.53
SMG5-204ENST00000476954 TMEM269A0A1B0GVZ9 245 aa11.74□□□□□ -0.53
SMG5-204ENST00000476954 A0A1W2PPE3 182 aa11.74□□□□□ -0.53
SMG5-204ENST00000476954 LINC01619G3V211 115 aa11.74□□□□□ -0.53
SMG5-204ENST00000476954 DHRS3O75911 302 aa11.74□□□□□ -0.53
SMG5-204ENST00000476954 H2AFXP16104 143 aaPredicted RBP11.74□□□□□ -0.53
SMG5-204ENST00000476954 PPIFP30405 207 aaKnown RBP11.74□□□□□ -0.53
SMG5-204ENST00000476954 NPBWR2P48146 333 aa11.74□□□□□ -0.53
SMG5-204ENST00000476954 MADCAM1Q13477 382 aa11.74□□□□□ -0.53
SMG5-204ENST00000476954 LCN1P1Q5VSP4 162 aa11.74□□□□□ -0.53
SMG5-204ENST00000476954 SLC25A26Q70HW3 274 aa11.74□□□□□ -0.53
SMG5-204ENST00000476954 MOB3BQ86TA1 216 aa11.74□□□□□ -0.53
SMG5-204ENST00000476954 OR8H3Q8N146 312 aa11.74□□□□□ -0.53
SMG5-204ENST00000476954 OR9Q2Q8NGE9 314 aa11.74□□□□□ -0.53
SMG5-204ENST00000476954 S1PR3Q99500 378 aa11.74□□□□□ -0.53
SMG5-204ENST00000476954 GID8Q9NWU2 228 aa11.74□□□□□ -0.53
SMG5-204ENST00000476954 PSG11Q9UQ72 335 aa11.74□□□□□ -0.53
SMG5-204ENST00000476954 DYNC1H1Q14204 4646 aaKnown RBP11.74□□□□□ -0.53
SMG5-204ENST00000476954 ODAMA1E959 279 aa11.73□□□□□ -0.53
SMG5-204ENST00000476954 CXorf65A6NEN9 183 aa11.73□□□□□ -0.53
SMG5-204ENST00000476954 BBIP1A8MTZ0 92 aa11.73□□□□□ -0.53
SMG5-204ENST00000476954 PRR32B1ATL7 298 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms