RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 ZNF665Q9H7R5 613 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 ZNF319Q9P2F9 582 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 SLC45A2Q9UMX9 530 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 A0A1W2PP11 408 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 PROB1E7EW31 1015 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 C11orf98E9PRG8 122 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 CYR61O00622 381 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 AQP7O14520 342 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 OPN1LWP04000 364 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 ZNF20P17024 532 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 UCP3P55916 312 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 UBE2G2P60604 165 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 RUNX1Q01196 453 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 MMDQ15546 238 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 SLC25A24Q6NUK1 477 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 LRP11Q86VZ4 500 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 TMEM256Q8N2U0 113 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 METTL27Q8N6F8 245 aaPredicted RBP12.05□□□□□ -0.48
HDAC1-206ENST00000476391 ZNF738Q8NE65 137 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 OR4B1Q8NGF8 309 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 OR51T1Q8NGJ9 327 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 ARRDC3Q96B67 414 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 CYYR1Q96J86 154 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 RASL10BQ96S79 203 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 VN1R3Q9BXE9 311 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 PECRQ9BY49 303 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 ZNF552Q9H707 407 aaPredicted RBP12.05□□□□□ -0.48
HDAC1-206ENST00000476391 ZNF701Q9NV72 531 aaPredicted RBP12.05□□□□□ -0.48
HDAC1-206ENST00000476391 ZNF581Q9P0T4 197 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 A0A0U1RQV5 110 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 KBTBD11O94819 623 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 IFNA1P01562 189 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 SLC35E2P0CK97 266 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 OMGP23515 440 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 NKX2-1P43699 371 aaPredicted RBP12.05□□□□□ -0.48
HDAC1-206ENST00000476391 DYNLT3P51808 116 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 TPPP2P59282 170 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 RPL23P62829 140 aaKnown RBP12.05□□□□□ -0.48
HDAC1-206ENST00000476391 MORN2Q502X0 79 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 KCNIP4Q6PIL6 250 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 OR2V1Q8NHB1 315 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 CMTM2Q8TAZ6 248 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 DDIT4LQ96D03 193 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 SPACA5Q96QH8 159 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 NKX2-4Q9H2Z4 354 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 TXNIPQ9H3M7 391 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 RNF115Q9Y4L5 304 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 WIPI2Q9Y4P8 454 aa12.05□□□□□ -0.48
HDAC1-206ENST00000476391 IGKV1D-8A0A087WSZ0 117 aa12.04□□□□□ -0.48
HDAC1-206ENST00000476391 CBY3A6NI87 242 aa12.04□□□□□ -0.48
HDAC1-206ENST00000476391 ZNF728P0DKX0 622 aa12.04□□□□□ -0.48
HDAC1-206ENST00000476391 BLVRBP30043 206 aaPredicted RBP12.04□□□□□ -0.48
HDAC1-206ENST00000476391 PRSS8Q16651 343 aa12.04□□□□□ -0.48
HDAC1-206ENST00000476391 CST9LP1Q5W188 147 aa12.04□□□□□ -0.48
HDAC1-206ENST00000476391 FBXO42Q6P3S6 717 aa12.04□□□□□ -0.48
HDAC1-206ENST00000476391 OGFOD3Q6PK18 319 aa12.04□□□□□ -0.48
HDAC1-206ENST00000476391 RNF144BQ7Z419 303 aa12.04□□□□□ -0.48
HDAC1-206ENST00000476391 OR5AS1Q8N127 324 aa12.04□□□□□ -0.48
HDAC1-206ENST00000476391 OR5T1Q8NG75 326 aa12.04□□□□□ -0.48
HDAC1-206ENST00000476391 PBOV1Q9GZY1 135 aa12.04□□□□□ -0.48
HDAC1-206ENST00000476391 CSTL1Q9H114 145 aa12.04□□□□□ -0.48
HDAC1-206ENST00000476391 COA3Q9Y2R0 106 aaPredicted RBP12.04□□□□□ -0.48
HDAC1-206ENST00000476391 ARID1BQ8NFD5 2236 aaPredicted RBP12.04□□□□□ -0.48
HDAC1-206ENST00000476391 LILRA1O75019 489 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 MPZL1O95297 269 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 RPL15P61313 204 aaKnown RBP12.03□□□□□ -0.48
HDAC1-206ENST00000476391 PLPP4Q5VZY2 271 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 Q6ZWC4 215 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 OR2A5Q96R48 311 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 ATP5SQ99766 215 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 VPS25Q9BRG1 176 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 PARD6GQ9BYG4 376 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-206ENST00000476391 THAP10Q9P2Z0 257 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-206ENST00000476391 HSPB7Q9UBY9 170 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 COX11Q9Y6N1 276 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 IGHV2-70DA0A0C4DH43 119 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 CEBPZOSA8MTT3 80 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 TMEM238C9JI98 176 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 OR2J2O76002 312 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 IGHEP01854 428 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 JMJD7P0C870 316 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 SELPP16109 830 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 SGCBQ16585 318 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 KLHL24Q6TFL4 600 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 CBLN3Q6UW01 205 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 DGAT2L6Q6ZPD8 337 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 RNF133Q8WVZ7 376 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 REPIN1Q9BWE0 567 aaKnown RBP12.03□□□□□ -0.48
HDAC1-206ENST00000476391 FOXQ1Q9C009 403 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 ANXA10Q9UJ72 324 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 PILRAQ9UKJ1 303 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 LAMTOR2Q9Y2Q5 125 aa12.03□□□□□ -0.48
HDAC1-206ENST00000476391 PRSS47A8MTI9 375 aa12.02□□□□□ -0.48
HDAC1-206ENST00000476391 HOXA2O43364 376 aa12.02□□□□□ -0.48
HDAC1-206ENST00000476391 NUPR1O60356 82 aa12.02□□□□□ -0.48
HDAC1-206ENST00000476391 MMP23AO75900 390 aa12.02□□□□□ -0.48
HDAC1-206ENST00000476391 FKBP1BP68106 108 aa12.02□□□□□ -0.48
HDAC1-206ENST00000476391 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.02□□□□□ -0.48
HDAC1-206ENST00000476391 TMEM41BQ5BJD5 291 aa12.02□□□□□ -0.48
HDAC1-206ENST00000476391 FNDC7Q5VTL7 733 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms