RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 KLF8O95600 359 aaPredicted RBP11.98□□□□□ -0.49
NPHP4-207ENST00000470763 CD55P08174 381 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 FAHP16930 419 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 TUBG1P23258 451 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 HHEXQ03014 270 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 COL10A1Q03692 680 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 RELQ04864 619 aaPredicted RBP11.98□□□□□ -0.49
NPHP4-207ENST00000470763 C9orf40Q8IXQ3 194 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 NECAP1Q8NC96 275 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 OR6X1Q8NH79 312 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 SNIP1Q8TAD8 396 aaKnown RBP11.98□□□□□ -0.49
NPHP4-207ENST00000470763 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.98□□□□□ -0.49
NPHP4-207ENST00000470763 MSI2Q96DH6 328 aaKnown RBP11.98□□□□□ -0.49
NPHP4-207ENST00000470763 GLRX2Q9NS18 164 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 CBLN4Q9NTU7 201 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 NKX2-6A6NCS4 301 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 SEMA4FO95754 770 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 ZNF25P17030 456 aaPredicted RBP11.98□□□□□ -0.49
NPHP4-207ENST00000470763 CLEC12BQ2HXU8 276 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 C16orf47Q6ZP98 133 aaPredicted RBP11.98□□□□□ -0.49
NPHP4-207ENST00000470763 CMTM1Q8IZ96 169 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 LGI3Q8N145 548 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 SSC4DQ8WTU2 575 aa11.98□□□□□ -0.49
NPHP4-207ENST00000470763 P2RY6Q15077 328 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 PPA1Q15181 289 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 TAF9Q16594 264 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 MPV17LQ2QL34 196 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 DTX1Q86Y01 620 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 CHD3Q12873 2000 aaKnown RBP11.97□□□□□ -0.49
NPHP4-207ENST00000470763 IFNL4K9M1U5 179 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 OR4A8P0C604 315 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 ALDH3B1P43353 468 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 DYNLT3P51808 116 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 TMEM196Q5HYL7 178 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 FAM90A2PQ658T7 463 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 OR1P1Q8NH06 330 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 ZNF721Q8TF20 911 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 RCC1LQ96I51 464 aaKnown RBP11.97□□□□□ -0.49
NPHP4-207ENST00000470763 TP53RKQ96S44 253 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 PLA2G2FQ9BZM2 168 aa11.97□□□□□ -0.49
NPHP4-207ENST00000470763 ZNF318Q5VUA4 2279 aa11.96□□□□□ -0.49
NPHP4-207ENST00000470763 PRR33A8MZF0 331 aa11.96□□□□□ -0.49
NPHP4-207ENST00000470763 RRP8O43159 456 aaKnown RBP11.96□□□□□ -0.49
NPHP4-207ENST00000470763 HSPA12AO43301 675 aa11.96□□□□□ -0.49
NPHP4-207ENST00000470763 ANGPTL7O43827 346 aa11.96□□□□□ -0.49
NPHP4-207ENST00000470763 TSPAN2O60636 221 aa11.96□□□□□ -0.49
NPHP4-207ENST00000470763 DDAH2O95865 285 aa11.96□□□□□ -0.49
NPHP4-207ENST00000470763 GABREP78334 506 aa11.96□□□□□ -0.49
NPHP4-207ENST00000470763 OR4D5Q8NGN0 318 aa11.96□□□□□ -0.49
NPHP4-207ENST00000470763 ADAMTS18Q8TE60 1221 aa11.96□□□□□ -0.49
NPHP4-207ENST00000470763 A0A1B0GU03 582 aa11.96□□□□□ -0.5
NPHP4-207ENST00000470763 MBP02144 154 aa11.96□□□□□ -0.5
NPHP4-207ENST00000470763 H3F3AP84243 136 aa11.96□□□□□ -0.5
NPHP4-207ENST00000470763 ZXDAP98168 799 aa11.96□□□□□ -0.5
NPHP4-207ENST00000470763 FAM180AQ6UWF9 173 aa11.96□□□□□ -0.5
NPHP4-207ENST00000470763 DOK3Q7L591 496 aa11.96□□□□□ -0.5
NPHP4-207ENST00000470763 BEND2Q8NDZ0 799 aa11.96□□□□□ -0.5
NPHP4-207ENST00000470763 WFIKKN1Q96NZ8 548 aa11.96□□□□□ -0.5
NPHP4-207ENST00000470763 GPHA2Q96T91 129 aa11.96□□□□□ -0.5
NPHP4-207ENST00000470763 ACTR3CQ9C0K3 210 aaPredicted RBP11.96□□□□□ -0.5
NPHP4-207ENST00000470763 METTL9Q9H1A3 318 aa11.96□□□□□ -0.5
NPHP4-207ENST00000470763 MOB1AQ9H8S9 216 aa11.96□□□□□ -0.5
NPHP4-207ENST00000470763 DECR2Q9NUI1 292 aa11.96□□□□□ -0.5
NPHP4-207ENST00000470763 NECAP2Q9NVZ3 263 aa11.96□□□□□ -0.5
NPHP4-207ENST00000470763 XKRY2A2RUG3 117 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 SHISA7A6NL88 538 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 PROB1E7EW31 1015 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 PITX3O75364 302 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 CYB5R3P00387 301 aaPredicted RBP11.95□□□□□ -0.5
NPHP4-207ENST00000470763 IGKV3-11P04433 115 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 AKT2P31751 481 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 CLRN1P58418 232 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 TLE1Q04724 770 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 TMEM252Q8N6L7 170 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 LYZL4Q96KX0 146 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 CHST11Q9NPF2 352 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 B4DGG1 531 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 TMEM150CB9EJG8 249 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 DFFBO76075 338 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 NKX2-1P43699 371 aaPredicted RBP11.95□□□□□ -0.5
NPHP4-207ENST00000470763 RND2P52198 227 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 CXorf66Q5JRM2 361 aaPredicted RBP11.95□□□□□ -0.5
NPHP4-207ENST00000470763 Q6ZSR6 202 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 OR8G5Q8NG78 346 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 OR10A7Q8NGE5 316 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 HIST1H2AAQ96QV6 131 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 CDH20Q9HBT6 801 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 LANCL2Q9NS86 450 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 LRFN1Q9P244 771 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 DKKL1Q9UK85 242 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 TCFL5Q9UL49 500 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 CFAP54Q96N23 3096 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 ARHGAP21Q5T5U3 1957 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 EFNA3P52797 238 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 PRSS12P56730 875 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 ZFP36L1Q07352 338 aaKnown RBP11.95□□□□□ -0.5
NPHP4-207ENST00000470763 ZNF154Q13106 437 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 LRP11Q86VZ4 500 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 RNASEH2CQ8TDP1 164 aaKnown RBP11.95□□□□□ -0.5
NPHP4-207ENST00000470763 PGAM5Q96HS1 289 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms