RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 MDFICQ9P1T7 246 aa2.78□□□□□ -1.96
HMGB1P25-201ENST00000468402 XCL2Q9UBD3 114 aa2.78□□□□□ -1.96
HMGB1P25-201ENST00000468402 FBXL3Q9UKT7 428 aa2.78□□□□□ -1.96
HMGB1P25-201ENST00000468402 FARSAQ9Y285 508 aaKnown RBP2.78□□□□□ -1.96
HMGB1P25-201ENST00000468402 COQ4Q9Y3A0 265 aa2.78□□□□□ -1.96
HMGB1P25-201ENST00000468402 USH1CQ9Y6N9 552 aa2.78□□□□□ -1.96
HMGB1P25-201ENST00000468402 MKI67P46013 3256 aaKnown RBP2.78□□□□□ -1.96
HMGB1P25-201ENST00000468402 MYO10Q9HD67 2058 aa2.78□□□□□ -1.96
HMGB1P25-201ENST00000468402 CCDC88CQ9P219 2028 aa2.78□□□□□ -1.96
HMGB1P25-201ENST00000468402 PLXNB3Q9ULL4 1909 aa2.78□□□□□ -1.97
HMGB1P25-201ENST00000468402 PLXND1Q9Y4D7 1925 aa2.78□□□□□ -1.97
HMGB1P25-201ENST00000468402 NRCAMQ92823 1304 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 A0A1B0GVI7 797 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 A0A1W2PQL4 384 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 C9J4A7 227 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 FTCDNL1E5RQL4 147 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZNF593O00488 134 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 UBDO15205 165 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 SLC31A1O15431 190 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 MAGEB4O15481 346 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 CRXO43186 299 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 DCTN3O75935 186 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 PROSCO94903 275 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 HLA-AP01891 365 aaKnown RBP2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 SHBGP04278 402 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 HSPB1P04792 205 aaKnown RBP2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 COX5BP10606 129 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 MIPP30301 263 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 COILP38432 576 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 KIR3DL2P43630 455 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 CAPZBP47756 277 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 TAF6P49848 677 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 GTF2A1P52655 376 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 HCCSP53701 268 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 AP1S2P56377 157 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 VSX2P58304 361 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 RAB4BP61018 213 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 DEFB103AP81534 67 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 REG3AQ06141 175 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 UNC119Q13432 240 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZNF266Q14584 549 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 ACTBL2Q562R1 376 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 SYPL2Q5VXT5 272 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 ANKRD22Q5VYY1 191 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 FRMPD2BQ6IN97 320 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 NIPAL1Q6NVV3 410 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 RNF165Q6ZSG1 346 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 MBOAT2Q6ZWT7 520 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 DEFB106AQ8N104 65 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 CA13Q8N1Q1 262 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 RIBC1Q8N443 379 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 CBR4Q8N4T8 237 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 MMGT1Q8N4V1 131 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZFP41Q8N8Y5 198 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 NKAPP1Q8N9T2 125 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZNF680Q8NEM1 530 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR5L1Q8NGL2 311 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR2A1Q8NGT9 310 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR2Y1Q8NGV0 311 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR2G3Q8NGZ4 309 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 PHOSPHO2Q8TCD6 241 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 DYNC2LI1Q8TCX1 351 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 BLOC1S5Q8TDH9 187 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 FAM172AQ8WUF8 416 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 TMEM230Q96A57 120 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 NTAN1Q96AB6 310 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 MAGEB18Q96M61 343 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 PACRGQ96M98 296 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 Q96MT0 163 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 RBP7Q96R05 134 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 VAT1Q99536 393 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 RASL11BQ9BPW5 248 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 PDCD1LG2Q9BQ51 273 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 NUDT9Q9BW91 350 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 FAM107BQ9H098 131 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 ARL6Q9H0F7 186 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 METTL9Q9H1A3 318 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR51J1Q9H342 316 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 GID8Q9NWU2 228 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 FAM206AQ9NX38 181 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 CLCF1Q9UBD9 225 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 CYB5R1Q9UHQ9 305 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 MOKQ9UQ07 419 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 ST3GAL6Q9Y274 331 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 HEY1Q9Y5J3 304 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 HEBP2Q9Y5Z4 205 aa2.77□□□□□ -1.97
HMGB1P25-201ENST00000468402 TCF20Q9UGU0 1960 aaKnown RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 BPTFQ12830 3046 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR2AT4A6NND4 320 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 KCNK1O00180 336 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 PIRO00625 290 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 XKRYO14609 159 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 MPZL2O60487 215 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 CST8O60676 142 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 SPAG7O75391 227 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 GATBO75879 557 aaKnown RBP2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 MMP23AO75900 390 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 HPRT1P00492 218 aa2.76□□□□□ -1.97
HMGB1P25-201ENST00000468402 SERPINA1P01009 418 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms