RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SATL1Q86VE3 508 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 PXT1Q8NFP0 134 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 SPATA3Q8NHX4 192 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 TNFRSF14Q92956 283 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 SNX22Q96L94 193 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 DUX5Q96PT3 197 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 DERL3Q96Q80 235 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 ZNF184Q99676 751 aaPredicted RBP10.58□□□□□ -0.72
COL5A1-206ENST00000465877 CHST6Q9GZX3 395 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 UNKLQ9H9P5 680 aaKnown RBP10.58□□□□□ -0.72
COL5A1-206ENST00000465877 SEBOXQ9HB31 216 aaPredicted RBP10.58□□□□□ -0.72
COL5A1-206ENST00000465877 TMEM138Q9NPI0 162 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 GLS2Q9UI32 602 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 RRP15Q9Y3B9 282 aaKnown RBP10.58□□□□□ -0.72
COL5A1-206ENST00000465877 PSPNO60542 156 aa10.57□□□□□ -0.72
COL5A1-206ENST00000465877 OR2H2O95918 312 aa10.57□□□□□ -0.72
COL5A1-206ENST00000465877 ALDOBP05062 364 aa10.57□□□□□ -0.72
COL5A1-206ENST00000465877 ZNF93P35789 620 aaPredicted RBP10.57□□□□□ -0.72
COL5A1-206ENST00000465877 MTNR1BP49286 362 aa10.57□□□□□ -0.72
COL5A1-206ENST00000465877 ACTG1P63261 375 aa10.57□□□□□ -0.72
COL5A1-206ENST00000465877 SPHARQ15513 63 aa10.57□□□□□ -0.72
COL5A1-206ENST00000465877 C1orf122Q6ZSJ8 110 aa10.57□□□□□ -0.72
COL5A1-206ENST00000465877 OR5D13Q8NGL4 314 aa10.57□□□□□ -0.72
COL5A1-206ENST00000465877 FAM216AQ8WUB2 273 aa10.57□□□□□ -0.72
COL5A1-206ENST00000465877 THRSPQ92748 146 aa10.57□□□□□ -0.72
COL5A1-206ENST00000465877 BLOC1S6Q9UL45 172 aa10.57□□□□□ -0.72
COL5A1-206ENST00000465877 A0A0U1RQK1 487 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 A0A1W2PPK0 400 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 MEX3AA1L020 520 aaKnown RBP10.56□□□□□ -0.72
COL5A1-206ENST00000465877 HOXA3O43365 443 aaPredicted RBP10.56□□□□□ -0.72
COL5A1-206ENST00000465877 GPX5O75715 221 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 ZNF44P15621 663 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 PRTN3P24158 256 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 MAPK3P27361 379 aaPredicted RBP10.56□□□□□ -0.72
COL5A1-206ENST00000465877 BMXP51813 675 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 RSU1Q15404 277 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 RBM48Q5RL73 367 aaKnown RBP10.56□□□□□ -0.72
COL5A1-206ENST00000465877 TMEM200BQ69YZ2 307 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 ELP2Q6IA86 826 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 PRSS48Q7RTY5 328 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 PIP4P2Q8N4L2 257 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 TPRX1Q8N7U7 411 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 OR4S1Q8NGB4 309 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 OR10K1Q8NGX5 313 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 PPP1R35Q8TAP8 253 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 TBC1D15Q8TC07 691 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 ZDHHC16Q969W1 377 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 TMED9Q9BVK6 235 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 CCDC90BQ9GZT6 254 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 PPA2Q9H2U2 334 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 FOXJ3Q9UPW0 622 aa10.56□□□□□ -0.72
COL5A1-206ENST00000465877 A0A1W2PRD5 423 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 A0A1W2PRF3 423 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 A0A1W2PRM7 423 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 CLDN34H7C241 214 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 SLC33A1O00400 549 aaPredicted RBP10.55□□□□□ -0.72
COL5A1-206ENST00000465877 SH2D1BO14796 132 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 MGST3O14880 152 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 NPFFO15130 113 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 CDRT1O95170 752 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 RNASE1P07998 156 aaKnown RBP10.55□□□□□ -0.72
COL5A1-206ENST00000465877 MELTFP08582 738 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 EEF1B2P24534 225 aaKnown RBP10.55□□□□□ -0.72
COL5A1-206ENST00000465877 SAA4P35542 130 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 PTGFRP43088 359 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 DLX6P56179 175 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 P2RX3P56373 397 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 IL13RA2Q14627 380 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 INSL4Q14641 139 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 SLC9A3R2Q15599 337 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 TBCEQ15813 527 aaPredicted RBP10.55□□□□□ -0.72
COL5A1-206ENST00000465877 LIPKQ5VXJ0 399 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 HCP5Q6MZN7 132 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 Q6P435 159 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 ZNF782Q6ZMW2 699 aaPredicted RBP10.55□□□□□ -0.72
COL5A1-206ENST00000465877 LDLRAD3Q86YD5 345 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 PNKDQ8N490 385 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 NKAIN3Q8N8D7 197 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 CHST4Q8NCG5 386 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 OR51T1Q8NGJ9 327 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 UFD1Q92890 307 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 SLC25A28Q96A46 364 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 ZNF714Q96N38 554 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 PRDM13Q9H4Q3 707 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 NOX4Q9NPH5 578 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 IL36GQ9NZH8 169 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 LINC00312Q9Y6C7 94 aa10.55□□□□□ -0.72
COL5A1-206ENST00000465877 KIAA2026Q5HYC2 2103 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 hCG_1809904A0A1W2PP81 198 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 A0A1W2PPE2 198 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 A0A1W2PR64 198 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 A0A1W2PRV1 198 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 hADV38S2A0JD32 116 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 MEIOCA2RUB1 952 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 PIN1P1O15428 100 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 CLPXO76031 633 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 HTR3BO95264 441 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 RBP4P02753 201 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 MAS1P04201 325 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 CSN2P05814 226 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms