RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 CHRM2P08172 466 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 SELLP14151 372 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 AMY2BP19961 511 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 RAB6AP20340 208 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 CPT2P23786 658 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 PITPNBP48739 271 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 EFNB2P52799 333 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 SCAND1P57086 179 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 COL10A1Q03692 680 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 MPV17LQ2QL34 196 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 ATPAF1Q5TC12 328 aaPredicted RBP8.48□□□□□ -1.05
UPF2-204ENST00000460569 METAP1DQ6UB28 335 aaPredicted RBP8.48□□□□□ -1.05
UPF2-204ENST00000460569 ZNF561Q8N587 486 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 ZNRF1Q8ND25 227 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 OR5H6Q8NGV6 325 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 KCTD12Q96CX2 325 aaKnown RBP8.48□□□□□ -1.05
UPF2-204ENST00000460569 SDSLQ96GA7 329 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 MED30Q96HR3 178 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 NICN1Q9BSH3 213 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 TM2D1Q9BX74 207 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 LPAR5Q9H1C0 372 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 ZNF581Q9P0T4 197 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 COMMD3Q9UBI1 195 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 KAAG1Q9UBP8 84 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 RAB22AQ9UL26 194 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 CREBBPQ92793 2442 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 A0A096LNT2 108 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 A0A0A6YYD4 124 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM90A10PA6NDY2 464 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM90A18PA6NE21 464 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM90A16PA6NEW6 464 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM90A20PA6NIJ5 464 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM90A8PA6NJQ4 464 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM90A7PA6NKC0 464 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM90A22PA8MWA6 464 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM90A12PA8MX19 464 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM90A5PA8MXJ8 464 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM90A23PA8MXZ1 464 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 H7C1Q1 480 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 SLC33A1O00400 549 aaPredicted RBP8.47□□□□□ -1.05
UPF2-204ENST00000460569 DVL1O14640 695 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 TNFRSF13BO14836 293 aaPredicted RBP8.47□□□□□ -1.05
UPF2-204ENST00000460569 NDUFB3O43676 98 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 WNT2P09544 360 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM90A15PP0C7V4 464 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM90A13PP0C7W8 464 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM90A14PP0C7W9 464 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM90A24PP0C7X0 464 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 IL2RGP31785 369 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 VEGFCP49767 419 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 SEC61A1P61619 476 aaKnown RBP8.47□□□□□ -1.05
UPF2-204ENST00000460569 LMO4P61968 165 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 LOXL1Q08397 574 aaPredicted RBP8.47□□□□□ -1.05
UPF2-204ENST00000460569 FAM189A2Q15884 450 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 ESCO2Q56NI9 601 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 PAN3Q58A45 887 aaKnown RBP8.47□□□□□ -1.05
UPF2-204ENST00000460569 LRRC10Q5BKY1 277 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 NKAPLQ5M9Q1 402 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 ATAD3CQ5T2N8 411 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 Q6P435 159 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 MZT2AQ6P582 158 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 SAMD12Q8N8I0 201 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 CHST4Q8NCG5 386 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 MAPK1IP1LQ8NDC0 245 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 NEK7Q8TDX7 302 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 ACOT12Q8WYK0 555 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 ST8SIA4Q92187 359 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 PTX4Q96A99 478 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 SLC25A38Q96DW6 304 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 CHST6Q9GZX3 395 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 ATG5Q9H1Y0 275 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 PPA2Q9H2U2 334 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 SEBOXQ9HB31 216 aaPredicted RBP8.47□□□□□ -1.05
UPF2-204ENST00000460569 RHBDL2Q9NX52 303 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 SLC25A10Q9UBX3 287 aaPredicted RBP8.47□□□□□ -1.05
UPF2-204ENST00000460569 CLN8Q9UBY8 286 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 SPATA2Q9UM82 520 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 MAB21L2Q9Y586 359 aa8.47□□□□□ -1.05
UPF2-204ENST00000460569 DOCK11Q5JSL3 2073 aa8.46□□□□□ -1.05
UPF2-204ENST00000460569 TRAV24A0A0B4J272 114 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 TMEM82A0PJX8 343 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 METTL21EPA6NDL7 271 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 PSPNO60542 156 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 PDCD6O75340 191 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 ZNF737O75373 536 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 NDUFB7P17568 137 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 BLVRBP30043 206 aaPredicted RBP8.46□□□□□ -1.06
UPF2-204ENST00000460569 OR3A1P47881 315 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 GNB2P62879 340 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 DYNC1I2Q13409 638 aaKnown RBP8.46□□□□□ -1.06
UPF2-204ENST00000460569 ATXN7L3Q14CW9 347 aaPredicted RBP8.46□□□□□ -1.06
UPF2-204ENST00000460569 GRK1Q15835 563 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 UBE2NLQ5JXB2 153 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 C17orf107Q6ZR85 190 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 OR8H2Q8N162 312 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 FGFRL1Q8N441 504 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 SUMF2Q8NBJ7 301 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 OR56B1Q8NGI3 324 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 PPP1R35Q8TAP8 253 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 H1FXQ92522 213 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms