RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 MAP1LC3B2A6NCE7 125 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 CYR61O00622 381 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 SSSCA1O60232 199 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 HRASP01112 189 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 UBE2V1Q13404 147 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 FAM189A2Q15884 450 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 ZNF787Q6DD87 383 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 OR8G2PQ6IF36 304 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.25■□□□□ 0.19
PTPA-223ENST00000452489 ODF3L1Q8IXM7 274 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 ZNF440Q8IYI8 595 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 OR5AS1Q8N127 324 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 TMEM252Q8N6L7 170 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 NT5CQ8TCD5 201 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 GNPNAT1Q96EK6 184 aaPredicted RBP16.25■□□□□ 0.19
PTPA-223ENST00000452489 RAB11FIP5Q9BXF6 653 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 MAP1LC3BQ9GZQ8 125 aa16.25■□□□□ 0.19
PTPA-223ENST00000452489 NXT1Q9UKK6 140 aaKnown RBP16.25■□□□□ 0.19
PTPA-223ENST00000452489 MCTS1Q9ULC4 181 aaKnown RBP16.25■□□□□ 0.19
PTPA-223ENST00000452489 TMEM225BP0DP42 221 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 FXYD4P59646 89 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 RPS15AP62244 130 aaKnown RBP16.24■□□□□ 0.19
PTPA-223ENST00000452489 ABCA11PQ4W5N1 156 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 LIAT1Q6ZQX7 453 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 Q8NFD4 153 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 ZNF519Q8TB69 540 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 PECRQ9BY49 303 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 S1PR5Q9H228 398 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 PILRAQ9UKJ1 303 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 LRRC3CA6NJW4 275 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 TSPAN2O60636 221 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 WISP1O95388 367 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 RPL27P61353 136 aaKnown RBP16.24■□□□□ 0.19
PTPA-223ENST00000452489 BSXQ3C1V8 233 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 DPPA3Q6W0C5 159 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 SMIM15Q7Z3B0 74 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 VSTM2LQ96N03 204 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 GPER1Q99527 375 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 VPS25Q9BRG1 176 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 PLSCR2Q9NRY7 297 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 FAM206AQ9NX38 181 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 NAT8Q9UHE5 227 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 RNF24Q9Y225 148 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 CACNA1IQ9P0X4 2223 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 VCANP13611 3396 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 TRPM6Q9BX84 2022 aa16.24■□□□□ 0.19
PTPA-223ENST00000452489 ANKUB1A6NFN9 424 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 ZNF20P17024 532 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 CLDN17P56750 224 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 FMODQ06828 376 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 ADAMTSL4Q6UY14 1074 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 MEX3BQ6ZN04 569 aaKnown RBP16.23■□□□□ 0.19
PTPA-223ENST00000452489 GRINAQ7Z429 371 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 BCORP1Q8N888 145 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 OR11L1Q8NGX0 322 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 OR2T10Q8NGZ9 312 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 MSI2Q96DH6 328 aaKnown RBP16.23■□□□□ 0.19
PTPA-223ENST00000452489 CCDC85CA6NKD9 419 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 RANP62826 216 aaKnown RBP16.23■□□□□ 0.19
PTPA-223ENST00000452489 RPL23P62829 140 aaKnown RBP16.23■□□□□ 0.19
PTPA-223ENST00000452489 MRPS34P82930 218 aaKnown RBP16.23■□□□□ 0.19
PTPA-223ENST00000452489 C1QL2Q7Z5L3 287 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 OR51E1Q8TCB6 317 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 PBOV1Q9GZY1 135 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 VSIRQ9H7M9 311 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 PLEKHF2Q9H8W4 249 aa16.23■□□□□ 0.19
PTPA-223ENST00000452489 HLA-HP01893 362 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 PPBPP02775 128 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 CTSBP07858 339 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 ZNF154Q13106 437 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 GCNT2Q8N0V5 402 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 OR2A5Q96R48 311 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 GABRG3Q99928 467 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 TUBG2Q9NRH3 451 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 HEBP2Q9Y5Z4 205 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 PCNX3Q9H6A9 2034 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 TRAV1-1A0A0B4J248 108 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 NKX2-6A6NCS4 301 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 SHISA7A6NL88 538 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 MSTNO14793 375 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 NXPH3O95157 252 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 ZNF823P16415 610 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 ECI1P42126 302 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 AGBL4Q5VU57 503 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 COMMD2Q86X83 199 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 H1FOOQ8IZA3 346 aaPredicted RBP16.22■□□□□ 0.19
PTPA-223ENST00000452489 MOB3AQ96BX8 217 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 ELL3Q9HB65 397 aaPredicted RBP16.22■□□□□ 0.19
PTPA-223ENST00000452489 TMEM9BQ9NQ34 198 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 KIAA2026Q5HYC2 2103 aa16.22■□□□□ 0.19
PTPA-223ENST00000452489 C17orf51A8MQB3 221 aa16.21■□□□□ 0.19
PTPA-223ENST00000452489 EFEMP2O95967 443 aa16.21■□□□□ 0.19
PTPA-223ENST00000452489 PRNPP04156 253 aa16.21■□□□□ 0.19
PTPA-223ENST00000452489 ZNF728P0DKX0 622 aa16.21■□□□□ 0.19
PTPA-223ENST00000452489 ZNF726P1Q15940 193 aa16.21■□□□□ 0.19
PTPA-223ENST00000452489 UNQ5815/PRO19632Q6UWF5 114 aa16.21■□□□□ 0.19
PTPA-223ENST00000452489 C6orf201Q7Z4U5 140 aa16.21■□□□□ 0.19
PTPA-223ENST00000452489 CISD2Q8N5K1 135 aaKnown RBP16.21■□□□□ 0.19
PTPA-223ENST00000452489 RPUSD4Q96CM3 377 aaKnown RBP16.21■□□□□ 0.19
PTPA-223ENST00000452489 CAPNS2Q96L46 248 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms