RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 DHRSXQ8N5I4 330 aa14.3□□□□□ -0.12
NUP50-208ENST00000430547 TPRX1Q8N7U7 411 aa14.3□□□□□ -0.12
NUP50-208ENST00000430547 OR52N4Q8NGI2 321 aa14.3□□□□□ -0.12
NUP50-208ENST00000430547 GPER1Q99527 375 aa14.3□□□□□ -0.12
NUP50-208ENST00000430547 MEGF9Q9H1U4 602 aa14.3□□□□□ -0.12
NUP50-208ENST00000430547 RAB18Q9NP72 206 aa14.3□□□□□ -0.12
NUP50-208ENST00000430547 CHCHD3Q9NX63 227 aaKnown RBP14.3□□□□□ -0.12
NUP50-208ENST00000430547 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.3□□□□□ -0.12
NUP50-208ENST00000430547 KIAA2026Q5HYC2 2103 aa14.29□□□□□ -0.12
NUP50-208ENST00000430547 IGKV1-12A0A0C4DH73 117 aa14.29□□□□□ -0.12
NUP50-208ENST00000430547 PSPNO60542 156 aa14.29□□□□□ -0.12
NUP50-208ENST00000430547 ALX3O95076 343 aa14.29□□□□□ -0.12
NUP50-208ENST00000430547 OR2H2O95918 312 aa14.29□□□□□ -0.12
NUP50-208ENST00000430547 IGKV1D-12P01611 117 aa14.29□□□□□ -0.12
NUP50-208ENST00000430547 SOX2P48431 317 aa14.29□□□□□ -0.12
NUP50-208ENST00000430547 ETV1P50549 477 aa14.29□□□□□ -0.12
NUP50-208ENST00000430547 GTF2A1P52655 376 aaPredicted RBP14.29□□□□□ -0.12
NUP50-208ENST00000430547 SCN1BQ07699 218 aa14.29□□□□□ -0.12
NUP50-208ENST00000430547 DYNC1I2Q13409 638 aaKnown RBP14.29□□□□□ -0.12
NUP50-208ENST00000430547 AANATQ16613 207 aa14.29□□□□□ -0.12
NUP50-208ENST00000430547 RPL22L1Q6P5R6 122 aaKnown RBP14.29□□□□□ -0.12
NUP50-208ENST00000430547 OR4S1Q8NGB4 309 aa14.29□□□□□ -0.12
NUP50-208ENST00000430547 GPR148Q8TDV2 347 aa14.29□□□□□ -0.12
NUP50-208ENST00000430547 FOXRED1Q96CU9 486 aaPredicted RBP14.29□□□□□ -0.12
NUP50-208ENST00000430547 EXOSC1Q9Y3B2 195 aaKnown RBP14.29□□□□□ -0.12
NUP50-208ENST00000430547 TBL2Q9Y4P3 447 aaKnown RBP14.29□□□□□ -0.12
NUP50-208ENST00000430547 PKD1L1Q8TDX9 2849 aa14.28□□□□□ -0.12
NUP50-208ENST00000430547 ERP29P30040 261 aaKnown RBP14.28□□□□□ -0.12
NUP50-208ENST00000430547 OR3A1P47881 315 aa14.28□□□□□ -0.12
NUP50-208ENST00000430547 P2RX3P56373 397 aa14.28□□□□□ -0.12
NUP50-208ENST00000430547 SRSF4Q08170 494 aaKnown RBP14.28□□□□□ -0.12
NUP50-208ENST00000430547 IL18R1Q13478 541 aa14.28□□□□□ -0.12
NUP50-208ENST00000430547 CDK5R1Q15078 307 aa14.28□□□□□ -0.12
NUP50-208ENST00000430547 OR2G6Q5TZ20 316 aa14.28□□□□□ -0.12
NUP50-208ENST00000430547 SATL1Q86VE3 508 aa14.28□□□□□ -0.12
NUP50-208ENST00000430547 GAL3ST2Q9H3Q3 398 aa14.28□□□□□ -0.12
NUP50-208ENST00000430547 C16orf95Q9H693 158 aa14.28□□□□□ -0.12
NUP50-208ENST00000430547 ABCB10Q9NRK6 738 aa14.28□□□□□ -0.12
NUP50-208ENST00000430547 DIMT1Q9UNQ2 313 aaKnown RBP14.28□□□□□ -0.12
NUP50-208ENST00000430547 MGAM2Q2M2H8 2515 aa14.28□□□□□ -0.12
NUP50-208ENST00000430547 TRGV10A0A0A0MS01 117 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 TIMM23O14925 209 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 TSPAN9O75954 239 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 CLPXO76031 633 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 PAX6P26367 422 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 PLA1AQ53H76 456 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 ZNF626Q68DY1 528 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 TREML4Q6UXN2 200 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 TCF23Q7RTU1 214 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 RNF144BQ7Z419 303 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 LHFPL4Q7Z7J7 247 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 CHST4Q8NCG5 386 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 OR4C13Q8NGP0 309 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 TMEM80Q96HE8 168 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 AJUBAQ96IF1 538 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 CITED1Q99966 193 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 FAM192AQ9GZU8 254 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 VCXQ9H320 206 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 UBE2J1Q9Y385 318 aaPredicted RBP14.27□□□□□ -0.13
NUP50-208ENST00000430547 SESN1Q9Y6P5 492 aa14.27□□□□□ -0.13
NUP50-208ENST00000430547 ODF3BA8MYP8 253 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 M0QZ24 198 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 DEGS1O15121 323 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 GABRA5P31644 462 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 MTNR1BP49286 362 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 PROK1P58294 105 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 ZP1P60852 638 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 PPP3R1P63098 170 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 FAM189A2Q15884 450 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 XAF1Q6GPH4 301 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 LIAT1Q6ZQX7 453 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 C8orf59Q8N0T1 100 aaPredicted RBP14.26□□□□□ -0.13
NUP50-208ENST00000430547 OR11H6Q8NGC7 330 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 TNFAIP8L1Q8WVP5 186 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 TMEM106AQ96A25 262 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 MALSU1Q96EH3 234 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 TCF7L1Q9HCS4 588 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 BABAM2Q9NXR7 383 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 TAS2R4Q9NYW5 299 aa14.26□□□□□ -0.13
NUP50-208ENST00000430547 LMO1P25800 156 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 ADARB1P78563 741 aaKnown RBP14.25□□□□□ -0.13
NUP50-208ENST00000430547 AESQ08117 197 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 RSU1Q15404 277 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 SSX2Q16385 188 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 SLC35E4Q6ICL7 350 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 OR52W1Q6IF63 320 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 DTX3Q8N9I9 347 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 PXT1Q8NFP0 134 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 NDNFQ8TB73 568 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 RGP1Q92546 391 aaPredicted RBP14.25□□□□□ -0.13
NUP50-208ENST00000430547 SMIM19Q96E16 107 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 NR1H4Q96RI1 486 aaPredicted RBP14.25□□□□□ -0.13
NUP50-208ENST00000430547 CLEC7AQ9BXN2 247 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 NPFFR1Q9GZQ6 430 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 TMEM133Q9H2Q1 129 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 ING3Q9NXR8 418 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 ZNF281Q9Y2X9 895 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 HSPE1-MOB4S4R3N1 261 aa14.25□□□□□ -0.13
NUP50-208ENST00000430547 IGHV2-26A0A0B4J1V2 119 aa14.24□□□□□ -0.13
NUP50-208ENST00000430547 A0A0G2JK05 382 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms