RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ZFYVE9O95405 1425 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 NID2Q14112 1375 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 PALLDQ8WX93 1383 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 CCL15-CCL14A0A0B4J2E2 113 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 A0A1B0GXF2 115 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 RBFOX3A6NFN3 312 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 OR2AT4A6NND4 320 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 H0Y980 276 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 BIRC5O15392 142 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 TGOLN2O43493 480 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 SYNGR1O43759 233 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 RAD1O60671 282 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 HPGDSO60760 199 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 SNAP29O95721 258 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 HLA-DQB1P01920 261 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 CD34P28906 385 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 P2RX1P51575 399 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 NKX2-5P52952 324 aaPredicted RBP2□□□□□ -2.09
HMGB1P49-201ENST00000418882 MTPNP58546 118 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 BAXQ07812 192 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 MGAT3Q09327 533 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 CCL15Q16663 113 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 IMPG1Q17R60 797 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 RNASE13Q5GAN3 156 aaKnown RBP2□□□□□ -2.09
HMGB1P49-201ENST00000418882 SYT6Q5T7P8 510 aaPredicted RBP2□□□□□ -2.09
HMGB1P49-201ENST00000418882 C8orf74Q6P047 294 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 HS3ST5Q8IZT8 346 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 KRT222Q8N1A0 295 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 ATP6V1C2Q8NEY4 427 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 OR5D18Q8NGL1 313 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 RNF133Q8WVZ7 376 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 ANP32BQ92688 251 aaKnown RBP2□□□□□ -2.09
HMGB1P49-201ENST00000418882 SLC25A46Q96AG3 418 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 CHMP6Q96FZ7 201 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 Q96MT0 163 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 BIRC8Q96P09 236 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 SPACA5Q96QH8 159 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 TEAD3Q99594 435 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 TMEM243Q9BU79 118 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 CDCA4Q9BXL8 241 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 BCL2L14Q9BZR8 327 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 LHX5Q9H2C1 402 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 C8orf17Q9NRJ1 99 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 FAM49BQ9NUQ9 324 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 ORC6Q9Y5N6 252 aa2□□□□□ -2.09
HMGB1P49-201ENST00000418882 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 ADAMTSL3P82987 1691 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 MAP3K5Q99683 1374 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 TRAV8-6A0A0B4J262 113 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 CEACAM18A8MTB9 384 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 C21orf140B9A014 251 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 M0QZ92 97 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 DNASE2O00115 360 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 FABP7O15540 132 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 REM1O75628 298 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 SERPINB7O75635 380 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 UPK1BO75841 260 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 OR5F1O95221 314 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 IFNA5P01569 189 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 IGLV2-8P01709 118 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 IGLV3-25P01717 112 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 HLA-AP01891 365 aaKnown RBP1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 KRT7P08729 469 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 HIST1H1CP16403 213 aaKnown RBP1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 UGT2B7P16662 529 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 RAB3AP20336 220 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 HTR1DP28221 377 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 IDH2P48735 452 aaKnown RBP1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 CDKN2DP55273 166 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 GFERP55789 205 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 DLX6P56179 175 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 SYNJ2BPP57105 145 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 RAB8AP61006 207 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 UBE2NP61088 152 aaKnown RBP1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 LSM6P62312 80 aaKnown RBP1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 RPL23P62829 140 aaKnown RBP1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 BASP1P80723 227 aaKnown RBP1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 MEF2BQ02080 365 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 CYP24A1Q07973 514 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 TOMM34Q15785 309 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 CDNFQ49AH0 187 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 TTC32Q5I0X7 151 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 CLVS2Q5SYC1 327 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 AVPI1Q5T686 147 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 KCTD16Q68DU8 428 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 PRNTQ86SH4 94 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 BBS7Q8IWZ6 715 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 Q8N402 240 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 ZNF645Q8N7E2 425 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 ST20-AS1Q8NBB2 130 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 TTLQ8NG68 377 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 OR51Q1Q8NH59 317 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 FAM45AQ8TCE6 357 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 GHSRQ92847 366 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 PTH2Q96A98 100 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 PPP1R14BQ96C90 147 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 SMARCD1Q96GM5 515 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 FMC1Q96HJ9 113 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 APOL4Q9BPW4 351 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms