RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 DTWD1Q8N5C7 304 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 OR8G5Q8NG78 346 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 DIRAS2Q96HU8 199 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 ATOH8Q96SQ7 321 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 FOXC2Q99958 501 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 APOBEC3GQ9HC16 384 aaKnown RBP4.8□□□□□ -1.64
CNGA1-202ENST00000402813 PLSCR3Q9NRY6 295 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 MED11Q9P086 117 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 KLF12Q9Y4X4 402 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 COL1A2P08123 1366 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 A0A0G2JLL6 359 aaPredicted RBP4.8□□□□□ -1.64
CNGA1-202ENST00000402813 DAPL1A0PJW8 107 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 A8MVM7 634 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 G3V2L1 256 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 TNFRSF11BO00300 401 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 KLF8O95600 359 aaPredicted RBP4.8□□□□□ -1.64
CNGA1-202ENST00000402813 TBX6O95947 436 aaPredicted RBP4.8□□□□□ -1.64
CNGA1-202ENST00000402813 IGHV2-5P01817 119 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 CYP2D6P10635 497 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 WT1P19544 449 aaPredicted RBP4.8□□□□□ -1.64
CNGA1-202ENST00000402813 IL12AP29459 219 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 LY6DQ14210 128 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 ZFP69Q49AA0 526 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 C6orf52Q5T4I8 152 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 PRSS48Q7RTY5 328 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 TFAP2CQ92754 450 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 BTN2A3PQ96KV6 586 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 GATA5Q9BWX5 397 aaPredicted RBP4.8□□□□□ -1.64
CNGA1-202ENST00000402813 THYN1Q9P016 225 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 RIMS3Q9UJD0 308 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 ASF1AQ9Y294 204 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 CHST2Q9Y4C5 530 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 SIRT4Q9Y6E7 314 aaPredicted RBP4.8□□□□□ -1.64
CNGA1-202ENST00000402813 FER1L6Q2WGJ9 1857 aa4.8□□□□□ -1.64
CNGA1-202ENST00000402813 TRAV39A0A0B4J263 110 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 TCRBV3S1A0A5B6 114 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 IDSB3KWA1 339 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 UPK1AO00322 258 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 HOXA3O43365 443 aaPredicted RBP4.79□□□□□ -1.64
CNGA1-202ENST00000402813 SOX15O60248 233 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 PFN1P07737 140 aaKnown RBP4.79□□□□□ -1.64
CNGA1-202ENST00000402813 TFPIP10646 304 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 AZU1P20160 251 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 GLRXP35754 106 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 SLC10A1Q14973 349 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 SCGB2B2Q4G0G5 96 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 DCST2Q5T1A1 773 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 ANKRD34AQ69YU3 496 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 RASSF6Q6ZTQ3 369 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 IFNEQ86WN2 208 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 OR7A2PQ8NGA2 310 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 OR4K17Q8NGC6 315 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 OR5M9Q8NGP3 310 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 OR6F1Q8NGZ6 308 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 DLX4Q92988 240 aaPredicted RBP4.79□□□□□ -1.64
CNGA1-202ENST00000402813 ZNF837Q96EG3 531 aaPredicted RBP4.79□□□□□ -1.64
CNGA1-202ENST00000402813 SCMH1Q96GD3 660 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 GPER1Q99527 375 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 SLC25A39Q9BZJ4 359 aaPredicted RBP4.79□□□□□ -1.64
CNGA1-202ENST00000402813 RNF186Q9NXI6 227 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 FRMPD3Q5JV73 1810 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 PLXNA1Q9UIW2 1896 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 TCRBV9S1A1TA0A576 114 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 MRPS12O15235 138 aaKnown RBP4.79□□□□□ -1.64
CNGA1-202ENST00000402813 B4GALT3O60512 393 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 CMPK1P30085 196 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 TAS2R30P59541 319 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 SNRPD1P62314 119 aaKnown RBP4.79□□□□□ -1.64
CNGA1-202ENST00000402813 CDK6Q00534 326 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 EBPQ15125 230 aaKnown RBP4.79□□□□□ -1.64
CNGA1-202ENST00000402813 FNDC7Q5VTL7 733 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 DNAJC24Q6P3W2 148 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 DHRS11Q6UWP2 260 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 IZUMO2Q6UXV1 221 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 C12orf54Q6X4T0 127 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 C15orf54Q8N8G6 183 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 RNF128Q8TEB7 428 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 PSMB7Q99436 277 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 ZNF649Q9BS31 505 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 MEGF9Q9H1U4 602 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 ARRDC1-AS1Q9H2J1 176 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 EFCAB1Q9HAE3 211 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 ACKR4Q9NPB9 350 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 AURKAIP1Q9NWT8 199 aaPredicted RBP4.79□□□□□ -1.64
CNGA1-202ENST00000402813 A0A1W2PP11 408 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 SPINT2O43291 252 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 OR7C2O60412 319 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 PSPNO60542 156 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 NDUFB4O95168 129 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 PLAUP00749 431 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 DBIP07108 87 aaKnown RBP4.79□□□□□ -1.64
CNGA1-202ENST00000402813 TDGF1P13385 188 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 SRIP30626 198 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 OR1D4P47884 311 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 TFPI2P48307 235 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 PTH2RP49190 550 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 PDX1P52945 283 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 MXD1Q05195 221 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 FAM27E3Q08E93 113 aa4.79□□□□□ -1.64
CNGA1-202ENST00000402813 TRIP6Q15654 476 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 666.6 ms