RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 RPS18P62269 152 aaKnown RBP17.85■□□□□ 0.45
CLK3-202ENST00000395066 NHLH2Q02577 135 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 Q6ZSR3 168 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 CD300LFQ8TDQ1 290 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 DECR2Q9NUI1 292 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 WNT16Q9UBV4 365 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 TINAGQ9UJW2 476 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 ST3GAL6Q9Y274 331 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 A0A1W2PPE2 198 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 NRASP01111 189 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 PRH1P02810 166 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 SPINK2P20155 84 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 SUCLG1P53597 346 aaKnown RBP17.85■□□□□ 0.45
CLK3-202ENST00000395066 ZNF92Q03936 586 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 RAB35Q15286 201 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 MEX3BQ6ZN04 569 aaKnown RBP17.85■□□□□ 0.45
CLK3-202ENST00000395066 PIGCQ92535 297 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 KCNJ16Q9NPI9 418 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 P4HTMQ9NXG6 502 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 ZNF587BE7ETH6 402 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 CXCL13O43927 109 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 GPR137BO60478 399 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 CFIP05156 583 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 RGS19P49795 217 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 RAC1P63000 192 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 PSG4Q00888 419 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 SLC23A3Q6PIS1 610 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 HSD17B11Q8NBQ5 300 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 OR14L1PQ8NHC6 308 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 SPSB1Q96BD6 273 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 SLC35B3Q9H1N7 401 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 KCNIP3Q9Y2W7 256 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 FBXO7Q9Y3I1 522 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 KLK3P07288 261 aaPredicted RBP17.84■□□□□ 0.45
CLK3-202ENST00000395066 TMEM38BQ9NVV0 291 aa17.84■□□□□ 0.45
CLK3-202ENST00000395066 PATE3B3GLJ2 98 aa17.84■□□□□ 0.45
CLK3-202ENST00000395066 IGHV2-70P01814 119 aa17.84■□□□□ 0.45
CLK3-202ENST00000395066 FGF5P12034 268 aa17.84■□□□□ 0.45
CLK3-202ENST00000395066 ACER2Q5QJU3 275 aa17.84■□□□□ 0.45
CLK3-202ENST00000395066 CALHM1Q8IU99 346 aa17.84■□□□□ 0.45
CLK3-202ENST00000395066 ZNF565Q8N9K5 539 aa17.84■□□□□ 0.45
CLK3-202ENST00000395066 EDARADDQ8WWZ3 215 aa17.84■□□□□ 0.45
CLK3-202ENST00000395066 PBDC1Q9BVG4 233 aa17.84■□□□□ 0.45
CLK3-202ENST00000395066 ZNF700Q9H0M5 742 aa17.84■□□□□ 0.45
CLK3-202ENST00000395066 WDR54Q9H977 334 aa17.84■□□□□ 0.45
CLK3-202ENST00000395066 STRAPQ9Y3F4 350 aaKnown RBP17.84■□□□□ 0.45
CLK3-202ENST00000395066 TNRC18O15417 2968 aaPredicted RBP17.83■□□□□ 0.45
CLK3-202ENST00000395066 FREM1Q5H8C1 2179 aa17.83■□□□□ 0.45
CLK3-202ENST00000395066 PHF1O43189 567 aaPredicted RBP17.83■□□□□ 0.44
CLK3-202ENST00000395066 NPBWR2P48146 333 aa17.83■□□□□ 0.44
CLK3-202ENST00000395066 RAB5CP51148 216 aa17.83■□□□□ 0.44
CLK3-202ENST00000395066 CNN3Q15417 329 aaKnown RBP17.83■□□□□ 0.44
CLK3-202ENST00000395066 CEACAM16Q2WEN9 425 aa17.83■□□□□ 0.44
CLK3-202ENST00000395066 GPR137CQ8N3F9 429 aa17.83■□□□□ 0.44
CLK3-202ENST00000395066 SH2D2AQ9NP31 389 aa17.83■□□□□ 0.44
CLK3-202ENST00000395066 NSG1A0A0A6YYJ2 146 aa17.83■□□□□ 0.44
CLK3-202ENST00000395066 SLC33A1O00400 549 aaPredicted RBP17.83■□□□□ 0.44
CLK3-202ENST00000395066 OR13C7P0DN81 318 aa17.83■□□□□ 0.44
CLK3-202ENST00000395066 B3GALT5-AS1P59052 145 aa17.83■□□□□ 0.44
CLK3-202ENST00000395066 GPR157Q5UAW9 335 aa17.83■□□□□ 0.44
CLK3-202ENST00000395066 PLCXD3Q63HM9 321 aa17.83■□□□□ 0.44
CLK3-202ENST00000395066 OSR2Q8N2R0 312 aa17.83■□□□□ 0.44
CLK3-202ENST00000395066 SUMF1Q8NBK3 374 aa17.83■□□□□ 0.44
CLK3-202ENST00000395066 C10orf35Q96D05 121 aa17.83■□□□□ 0.44
CLK3-202ENST00000395066 CARD18P57730 90 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 WIPI1Q5MNZ9 446 aaPredicted RBP17.82■□□□□ 0.44
CLK3-202ENST00000395066 TP53RKQ96S44 253 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 HSF4Q9ULV5 492 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 RCL1Q9Y2P8 373 aaKnown RBP17.82■□□□□ 0.44
CLK3-202ENST00000395066 CBR3O75828 277 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 TRAPPC6AO75865 159 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 AADACP22760 399 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 LMO1P25800 156 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 C9orf135Q5VTT2 229 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 FBXW12Q6X9E4 464 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 AAED1Q7RTV5 226 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 GGNQ86UU5 652 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 AGBL5Q8NDL9 886 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 HPSE2Q8WWQ2 592 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 MSI2Q96DH6 328 aaKnown RBP17.82■□□□□ 0.44
CLK3-202ENST00000395066 ZNF845Q96IR2 970 aaPredicted RBP17.82■□□□□ 0.44
CLK3-202ENST00000395066 WNT5BQ9H1J7 359 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 TMPRSS5Q9H3S3 457 aa17.82■□□□□ 0.44
CLK3-202ENST00000395066 OR7C1O76099 320 aaPredicted RBP17.81■□□□□ 0.44
CLK3-202ENST00000395066 RAB1AP62820 205 aa17.81■□□□□ 0.44
CLK3-202ENST00000395066 EXT1Q16394 746 aa17.81■□□□□ 0.44
CLK3-202ENST00000395066 LIAT1Q6ZQX7 453 aa17.81■□□□□ 0.44
CLK3-202ENST00000395066 ABHD3Q8WU67 409 aa17.81■□□□□ 0.44
CLK3-202ENST00000395066 ZNF716A6NP11 495 aa17.81■□□□□ 0.44
CLK3-202ENST00000395066 TERTO14746 1132 aaKnown RBP17.81■□□□□ 0.44
CLK3-202ENST00000395066 PPIHO43447 177 aaKnown RBP17.81■□□□□ 0.44
CLK3-202ENST00000395066 IFNA17P01571 189 aa17.81■□□□□ 0.44
CLK3-202ENST00000395066 MLF1P58340 268 aa17.81■□□□□ 0.44
CLK3-202ENST00000395066 DAZAP2Q15038 168 aaPredicted RBP17.81■□□□□ 0.44
CLK3-202ENST00000395066 NCMAPQ5T1S8 102 aa17.81■□□□□ 0.44
CLK3-202ENST00000395066 SLC35G3Q8N808 338 aa17.81■□□□□ 0.44
CLK3-202ENST00000395066 ZNF442Q9H7R0 627 aa17.81■□□□□ 0.44
CLK3-202ENST00000395066 TRBV23-1A0A0A0MS06 115 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 OR6C6A6NF89 314 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 DTYMKP23919 212 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms