RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PRKNO60260 465 aaPredicted RBP17.44■□□□□ 0.38
SHANK1-203ENST00000391813 TTRP02766 147 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 CDX1P47902 265 aaPredicted RBP17.44■□□□□ 0.38
SHANK1-203ENST00000391813 ERHP84090 104 aaKnown RBP17.44■□□□□ 0.38
SHANK1-203ENST00000391813 S1PR3Q99500 378 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 TEX50A0A1B0GTY4 177 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 AGFG1P52594 562 aaKnown RBP17.43■□□□□ 0.38
SHANK1-203ENST00000391813 B2MP61769 119 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 EWSR1Q01844 656 aaKnown RBP eCLIP17.43■□□□□ 0.38
SHANK1-203ENST00000391813 ARSJQ5FYB0 599 aaPredicted RBP17.43■□□□□ 0.38
SHANK1-203ENST00000391813 LRP11Q86VZ4 500 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 TREM2Q9NZC2 230 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 FUT9Q9Y231 359 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 TRIP12Q14669 1992 aaPredicted RBP17.43■□□□□ 0.38
SHANK1-203ENST00000391813 PCM1Q15154 2024 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 TMIGD3P0DMS9 266 aaPredicted RBP17.43■□□□□ 0.38
SHANK1-203ENST00000391813 EDN3P14138 238 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 HOXB1P14653 301 aaPredicted RBP17.43■□□□□ 0.38
SHANK1-203ENST00000391813 ELOBQ15370 118 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 OR1F12Q8NHA8 337 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 MRPL24Q96A35 216 aaKnown RBP17.43■□□□□ 0.38
SHANK1-203ENST00000391813 CLEC1BQ9P126 229 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 RCC2Q9P258 522 aaKnown RBP17.43■□□□□ 0.38
SHANK1-203ENST00000391813 CACNG5Q9UF02 275 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 OR5G3P0C626 314 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 CDAP32320 146 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 RPEL1Q2QD12 228 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 OR10G8Q8NGN5 311 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 ROBO4Q8WZ75 1007 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 SLC25A22Q9H936 323 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 K7ERU9 68 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 LAMTOR1Q6IAA8 161 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 MYPOPQ86VE0 399 aaPredicted RBP17.43■□□□□ 0.38
SHANK1-203ENST00000391813 FBXO17Q96EF6 278 aa17.43■□□□□ 0.38
SHANK1-203ENST00000391813 HYAL3O43820 417 aaPredicted RBP17.42■□□□□ 0.38
SHANK1-203ENST00000391813 CTSVO60911 334 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 TRIP6Q15654 476 aaKnown RBP17.42■□□□□ 0.38
SHANK1-203ENST00000391813 FA2HQ7L5A8 372 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 STARD4Q96DR4 205 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 NPDC1Q9NQX5 325 aaPredicted RBP17.42■□□□□ 0.38
SHANK1-203ENST00000391813 SLC45A2Q9UMX9 530 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 Q5BKY6 102 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 DMRTC1Q5HYR2 192 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 C19orf48Q6RUI8 117 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 VN1R4Q7Z5H5 301 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 LINC00469Q8N7U9 141 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 ADAD2Q8NCV1 583 aaKnown RBP17.42■□□□□ 0.38
SHANK1-203ENST00000391813 KCNE4Q8WWG9 221 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 GSX1Q9H4S2 264 aaPredicted RBP17.42■□□□□ 0.38
SHANK1-203ENST00000391813 LANCL2Q9NS86 450 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 CXorf65A6NEN9 183 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 CYC1P08574 325 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 GNG4P50150 75 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 DHRS13Q6UX07 377 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 C20orf196Q8IYI0 205 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 DEFB124Q8NES8 71 aa17.42■□□□□ 0.38
SHANK1-203ENST00000391813 C5orf49A4QMS7 147 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 PRRG2O14669 202 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 ZNF253O75346 499 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 FCARP24071 287 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 RTL8BQ17RB0 113 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 VAX1Q5SQQ9 334 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 PRR27Q6MZM9 219 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 RNASEKQ6P5S7 137 aaKnown RBP17.41■□□□□ 0.38
SHANK1-203ENST00000391813 MFRPQ9BY79 579 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 COMMD5Q9GZQ3 224 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 SOCS1O15524 211 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 SYNGR2O43760 224 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 ENSAO43768 121 aaKnown RBP17.41■□□□□ 0.38
SHANK1-203ENST00000391813 GCM2O75603 506 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-203ENST00000391813 EFNB2P52799 333 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 SPCS3P61009 180 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 MESTQ5EB52 335 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 ZNF547Q8IVP9 402 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 Q8IYB0 196 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 OR1N1Q8NGS0 311 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 LOXL4Q96JB6 756 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 IGHV1OR21-1A0A087WYE8 117 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 PLPP3O14495 311 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 RER1O15258 196 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 ERRFI1Q9UJM3 462 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-203ENST00000391813 ZGLP1P0C6A0 271 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 FGF8P55075 233 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-203ENST00000391813 PAX5Q02548 391 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 SLC35E3Q7Z769 313 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 OR10AC1Q8NH08 325 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 SARAFQ96BY9 339 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 C10orf35Q96D05 121 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 DOCK3Q8IZD9 2030 aa17.41■□□□□ 0.38
SHANK1-203ENST00000391813 GPM6AP51674 278 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 RHOBP62745 196 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 MPV17LQ2QL34 196 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 GUSBP11Q6P575 273 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 H1FOOQ8IZA3 346 aaPredicted RBP17.4■□□□□ 0.38
SHANK1-203ENST00000391813 APOBEC3DQ96AK3 386 aaPredicted RBP17.4■□□□□ 0.38
SHANK1-203ENST00000391813 TMEM191AQ9H0A3 160 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 SLC31A2O15432 143 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 VSIG8P0DPA2 414 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 MYBPHQ13203 477 aa17.4■□□□□ 0.38
SHANK1-203ENST00000391813 COL19A1Q14993 1142 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms