RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 FAM90A18PA6NE21 464 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 FAM90A16PA6NEW6 464 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 FAM90A20PA6NIJ5 464 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 FAM90A8PA6NJQ4 464 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 FAM90A7PA6NKC0 464 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 FAM90A22PA8MWA6 464 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 FAM90A12PA8MX19 464 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 FAM90A5PA8MXJ8 464 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 FAM90A23PA8MXZ1 464 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 IGKV1D-12P01611 117 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 PRH1P02810 166 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 FAM90A15PP0C7V4 464 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 FAM90A13PP0C7W8 464 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 FAM90A14PP0C7W9 464 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 FAM90A24PP0C7X0 464 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 FUT3P21217 361 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 MLF1P58340 268 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 ZFP36L1Q07352 338 aaKnown RBP15.53■□□□□ 0.08
PHF1-201ENST00000374512 ZNF266Q14584 549 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 OR5L1Q8NGL2 311 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 BSCL2Q96G97 398 aaPredicted RBP15.53■□□□□ 0.08
PHF1-201ENST00000374512 SGCZQ96LD1 299 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 SPACA1Q9HBV2 294 aa15.53■□□□□ 0.08
PHF1-201ENST00000374512 hCG_38984A0A1B0GV85 526 aa15.52■□□□□ 0.08
PHF1-201ENST00000374512 EIF3GO75821 320 aaKnown RBP eCLIP15.52■□□□□ 0.08
PHF1-201ENST00000374512 ZNF32P17041 273 aa15.52■□□□□ 0.08
PHF1-201ENST00000374512 SRD5A2P31213 254 aa15.52■□□□□ 0.08
PHF1-201ENST00000374512 HTR5AP47898 357 aa15.52■□□□□ 0.08
PHF1-201ENST00000374512 RBM11P57052 281 aaKnown RBP15.52■□□□□ 0.08
PHF1-201ENST00000374512 SNRPEP62304 92 aaKnown RBP15.52■□□□□ 0.08
PHF1-201ENST00000374512 EIF2S3LQ2VIR3 472 aaKnown RBP15.52■□□□□ 0.08
PHF1-201ENST00000374512 PIGYQ3MUY2 71 aa15.52■□□□□ 0.08
PHF1-201ENST00000374512 OR52M1Q8NGK5 317 aa15.52■□□□□ 0.08
PHF1-201ENST00000374512 MALSU1Q96EH3 234 aa15.52■□□□□ 0.08
PHF1-201ENST00000374512 SPIN2AQ99865 258 aa15.52■□□□□ 0.08
PHF1-201ENST00000374512 SPIN2BQ9BPZ2 258 aa15.52■□□□□ 0.08
PHF1-201ENST00000374512 TCEAL7Q9BRU2 100 aa15.52■□□□□ 0.08
PHF1-201ENST00000374512 KCNJ16Q9NPI9 418 aa15.52■□□□□ 0.08
PHF1-201ENST00000374512 FAM86C1Q9NVL1 165 aa15.52■□□□□ 0.08
PHF1-201ENST00000374512 ZDHHC8Q9ULC8 765 aa15.52■□□□□ 0.08
PHF1-201ENST00000374512 ZNF816-ZNF321PA0A0X1KG74 233 aa15.52■□□□□ 0.07
PHF1-201ENST00000374512 UMAD1C9J7I0 102 aa15.52■□□□□ 0.07
PHF1-201ENST00000374512 PHF1O43189 567 aaPredicted RBP15.52■□□□□ 0.07
PHF1-201ENST00000374512 XRCC2O43543 280 aa15.52■□□□□ 0.07
PHF1-201ENST00000374512 ZNF44P15621 663 aa15.52■□□□□ 0.07
PHF1-201ENST00000374512 FOLR3P41439 243 aa15.52■□□□□ 0.07
PHF1-201ENST00000374512 ZXDAP98168 799 aa15.52■□□□□ 0.07
PHF1-201ENST00000374512 Q8NFD4 153 aa15.52■□□□□ 0.07
PHF1-201ENST00000374512 BOD1Q96IK1 185 aa15.52■□□□□ 0.07
PHF1-201ENST00000374512 MPPED1O15442 326 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 S100A9P06702 114 aaKnown RBP15.51■□□□□ 0.07
PHF1-201ENST00000374512 SNRNP70P08621 437 aaKnown RBP15.51■□□□□ 0.07
PHF1-201ENST00000374512 CARD18P57730 90 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 TSPO2Q5TGU0 170 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 PARP12Q9H0J9 701 aaKnown RBP15.51■□□□□ 0.07
PHF1-201ENST00000374512 TMEM222Q9H0R3 208 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 RCL1Q9Y2P8 373 aaKnown RBP15.51■□□□□ 0.07
PHF1-201ENST00000374512 C3orf85A0A1B0GTC6 90 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 DUXBA0A1W2PPF3 345 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 BTBD17A6NE02 478 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 ZNF716A6NP11 495 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 M0R036 132 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 PPYP01298 95 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 B3GALT5-AS1P59052 145 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 RND3P61587 244 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 PSG4Q00888 419 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 TRIM61Q5EBN2 209 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 AAED1Q7RTV5 226 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 OR2C3Q8N628 320 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 SLC35G3Q8N808 338 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 TMEM56Q96MV1 263 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 OR2H1Q9GZK4 316 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 C11orf1Q9H5F2 150 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 UNKLQ9H9P5 680 aaKnown RBP15.51■□□□□ 0.07
PHF1-201ENST00000374512 ZNF581Q9P0T4 197 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 METTL1Q9UBP6 276 aaKnown RBP15.51■□□□□ 0.07
PHF1-201ENST00000374512 TMEM56-RWDD3S4R434 201 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 RTTNQ86VV8 2226 aa15.51■□□□□ 0.07
PHF1-201ENST00000374512 TRDCB7Z8K6 153 aa15.5■□□□□ 0.07
PHF1-201ENST00000374512 K7N7A8 449 aa15.5■□□□□ 0.07
PHF1-201ENST00000374512 ACAA1P09110 424 aaPredicted RBP15.5■□□□□ 0.07
PHF1-201ENST00000374512 AADACP22760 399 aa15.5■□□□□ 0.07
PHF1-201ENST00000374512 MAS1LP35410 378 aa15.5■□□□□ 0.07
PHF1-201ENST00000374512 EWSR1Q01844 656 aaKnown RBP eCLIP15.5■□□□□ 0.07
PHF1-201ENST00000374512 NHLH2Q02577 135 aa15.5■□□□□ 0.07
PHF1-201ENST00000374512 RSPO4Q2I0M5 234 aaPredicted RBP15.5■□□□□ 0.07
PHF1-201ENST00000374512 AKIRIN2Q53H80 203 aa15.5■□□□□ 0.07
PHF1-201ENST00000374512 CLEC9AQ6UXN8 241 aa15.5■□□□□ 0.07
PHF1-201ENST00000374512 ETV3LQ6ZN32 361 aa15.5■□□□□ 0.07
PHF1-201ENST00000374512 C1orf210Q8IVY1 113 aa15.5■□□□□ 0.07
PHF1-201ENST00000374512 SPSB4Q96A44 273 aa15.5■□□□□ 0.07
PHF1-201ENST00000374512 FOXB1Q99853 325 aa15.5■□□□□ 0.07
PHF1-201ENST00000374512 SLC25A31Q9H0C2 315 aa15.5■□□□□ 0.07
PHF1-201ENST00000374512 WDR87Q6ZQQ6 2873 aa15.5■□□□□ 0.07
PHF1-201ENST00000374512 SDK2Q58EX2 2172 aa15.5■□□□□ 0.07
PHF1-201ENST00000374512 RAB5AP20339 215 aa15.49■□□□□ 0.07
PHF1-201ENST00000374512 NRN1LQ496H8 165 aa15.49■□□□□ 0.07
PHF1-201ENST00000374512 PLCXD3Q63HM9 321 aa15.49■□□□□ 0.07
PHF1-201ENST00000374512 AKR7LQ8NHP1 331 aa15.49■□□□□ 0.07
PHF1-201ENST00000374512 WNT5BQ9H1J7 359 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms