RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ZNF596Q8TC21 504 aa10.97□□□□□ -0.65
CXCL12-202ENST00000374426 IL4I1Q96RQ9 567 aa10.97□□□□□ -0.65
CXCL12-202ENST00000374426 HHLA2Q9UM44 414 aa10.97□□□□□ -0.65
CXCL12-202ENST00000374426 TRGV10A0A0A0MS01 117 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 IGKV1-9A0A0C4DH69 117 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 LOC107986453A0A1B0GWG9 222 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 METTL15A6NJ78 407 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 ZAR1LA6NP61 321 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 LEUTXA8MZ59 168 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 SIRPB1O00241 398 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 APOL3O95236 402 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 CLIC3O95833 236 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 SERPINA3P01011 423 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 PRKACAP17612 351 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 CD34P28906 385 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 POU3F4P49335 361 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 RBP2P50120 134 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 CDC42P60953 191 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 SPIN3Q5JUX0 258 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 OR52W1Q6IF63 320 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 ETV3LQ6ZN32 361 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 GID4Q8IVV7 300 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 MRPL41Q8IXM3 137 aaKnown RBP10.96□□□□□ -0.65
CXCL12-202ENST00000374426 RDH10Q8IZV5 341 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 OSR2Q8N2R0 312 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 CCDC54Q8NEL0 328 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 DNAAF1Q8NEP3 725 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 PP6455Q8WZ26 134 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 CORO2AQ92828 525 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 UTP4Q969X6 686 aaKnown RBP10.96□□□□□ -0.65
CXCL12-202ENST00000374426 C10orf35Q96D05 121 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 GAL3ST2Q9H3Q3 398 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 ZNF286AQ9HBT8 521 aa10.96□□□□□ -0.65
CXCL12-202ENST00000374426 LY6LH3BQJ8 138 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 BUB1B-PAK6H3BSN5 160 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 SULT1C4O75897 302 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 OR2H2O95918 312 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 OR2T7P0C7T2 308 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 KIR3DL2P43630 455 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 GLIPR1P48060 266 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 ARHGDIBP52566 201 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 ATP1B3P54709 279 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 MTCP1P56278 107 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 CD69Q07108 199 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 AESQ08117 197 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 HLA-DRB5Q30154 266 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 UTF1Q5T230 341 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 TPTE2P1Q5T6R2 138 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 RNF166Q96A37 237 aaPredicted RBP10.95□□□□□ -0.66
CXCL12-202ENST00000374426 ADAT3Q96EY9 351 aaPredicted RBP10.95□□□□□ -0.66
CXCL12-202ENST00000374426 B9D2Q9BPU9 175 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 ADI1Q9BV57 179 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 HMG20AQ9NP66 347 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 KRT84Q9NSB2 600 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 TAS2R3Q9NYW6 316 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 WARS2Q9UGM6 360 aaKnown RBP10.95□□□□□ -0.66
CXCL12-202ENST00000374426 GLS2Q9UI32 602 aa10.95□□□□□ -0.66
CXCL12-202ENST00000374426 IGKV1-12A0A0C4DH73 117 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 E9PQ18 207 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 M0QZK8 103 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 SH2D1BO14796 132 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 FAM107AO95990 144 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 CYB5AP00167 134 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 IGKV1D-12P01611 117 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 UBCP0CG48 685 aaKnown RBP10.94□□□□□ -0.66
CXCL12-202ENST00000374426 HTR1FP30939 366 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 CEACAM3P40198 252 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 ISL1P61371 349 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 PDZK1IP1Q13113 114 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 C9orf152Q5JTZ5 239 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 CCDC197Q8NCU1 140 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 OR10H4Q8NGA5 316 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 WWC2-AS2Q96NR7 200 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 EXOSC4Q9NPD3 245 aaKnown RBP10.94□□□□□ -0.66
CXCL12-202ENST00000374426 POMPQ9Y244 141 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 GSTK1Q9Y2Q3 226 aa10.94□□□□□ -0.66
CXCL12-202ENST00000374426 A0A087X0M5 115 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 A0A1B0GX30 115 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 ODAMA1E959 279 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 FUOMA2VDF0 154 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 PSMB11A5LHX3 300 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 ATF1P18846 271 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 LMO1P25800 156 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 OR3A4PP47883 348 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 THBS3P49746 956 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 KPNB1Q14974 876 aaKnown RBP10.93□□□□□ -0.66
CXCL12-202ENST00000374426 KDM4DQ6B0I6 523 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 UTS2BQ765I0 119 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 RNF144BQ7Z419 303 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 ZNF329Q86UD4 541 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 RFT1Q96AA3 541 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 CREB3L1Q96BA8 519 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 COQ2Q96H96 371 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 ZNF649Q9BS31 505 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 GPR61Q9BZJ8 451 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 COMMD4Q9H0A8 199 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 PCDHGB5Q9Y5G0 923 aa10.93□□□□□ -0.66
CXCL12-202ENST00000374426 FAM90A18PA6NE21 464 aa10.92□□□□□ -0.66
CXCL12-202ENST00000374426 FAM90A16PA6NEW6 464 aa10.92□□□□□ -0.66
CXCL12-202ENST00000374426 FAM90A20PA6NIJ5 464 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms