RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 AADACP22760 399 aa13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 CYCSP99999 105 aaKnown RBP13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 SURF2Q15527 256 aaPredicted RBP13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 CLEC9AQ6UXN8 241 aa13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 SLC30A7Q8NEW0 376 aa13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 RTN4IP1Q8WWV3 396 aaPredicted RBP13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 FAM86C1Q9NVL1 165 aa13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 SNTB1Q13884 538 aaKnown RBP13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 BCL2L2Q92843 193 aaPredicted RBP13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 MRPS24Q96EL2 167 aaKnown RBP13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 PIK3IP1Q96FE7 263 aa13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 TRIB1Q96RU8 372 aa13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 C1orf123Q9NWV4 160 aa13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 ATPIF1Q9UII2 106 aa13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 HS3ST1O14792 307 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 RHBDL1O75783 438 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 PRKACAP17612 351 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 IDH3GP51553 393 aaPredicted RBP13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 ARHGDIBP52566 201 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 GGNBP1Q5YKI7 109 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 NSUN5P2Q63ZY6 315 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 PRSS54Q6PEW0 395 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 DHRS11Q6UWP2 260 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 SUN5Q8TC36 379 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 TMED6Q8WW62 240 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 HIST1H2AAQ96QV6 131 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 ZDHHC11Q9H8X9 412 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 SLC2A9Q9NRM0 540 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 LSM5Q9Y4Y9 91 aaKnown RBP13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 CDRT15L2A8MXV6 281 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 SCTP09683 121 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 SELEP16581 610 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 NUP62P37198 522 aaPredicted RBP13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 OR2A2Q6IF42 318 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 LYZL2Q7Z4W2 148 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 CNEP1R1Q8N9A8 125 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 RDH5Q92781 318 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 TECTBQ96PL2 329 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 RNF122Q9H9V4 155 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 ASCL3Q9NQ33 180 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 ZC4H2Q9NQZ6 224 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 DMXL2Q8TDJ6 3036 aa13.69□□□□□ -0.22
CNKSR1-202ENST00000374253 PTPRZ1P23471 2315 aaPredicted RBP13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 TRAPPC2LH3BP13 241 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 COX5BP10606 129 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 ZNF585AQ6P3V2 769 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 BVESQ8NE79 360 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 MARVELD3Q96A59 401 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 SLC25A32Q9H2D1 315 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 CYTL1Q9NRR1 136 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 SMG1Q96Q15 3661 aaKnown RBP13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 DCHS1Q96JQ0 3298 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 TRBV6-7A0A0A0MS04 114 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 SS18L1O75177 396 aaPredicted RBP13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 AKR1C2P52895 323 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 AKR1C1Q04828 323 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 GTF3C1Q12789 2109 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 SMIM3Q9BZL3 60 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 ASF1BQ9NVP2 202 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 SESN1Q9Y6P5 492 aa13.68□□□□□ -0.22
CNKSR1-202ENST00000374253 TRAV39A0A0B4J263 110 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 ANKRD30BLA7E2S9 258 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 DIRAS3O95661 229 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 CST4P01036 141 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 FGF2P09038 288 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 HOXA4Q00056 320 aaPredicted RBP13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 DEFB109BQ30KR1 87 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 ALKBH6Q3KRA9 238 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 PAN3Q58A45 887 aaKnown RBP13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 MEX3BQ6ZN04 569 aaKnown RBP13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 FAM117AQ9C073 453 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 NAA60Q9H7X0 242 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 BARX1Q9HBU1 254 aaPredicted RBP13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 PCDHB16Q9NRJ7 776 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 TAS2R3Q9NYW6 316 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 KIAA2026Q5HYC2 2103 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 A8MXK9 166 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 RCC1P18754 421 aaPredicted RBP13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 IGHV1-2P23083 117 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 FGF12P61328 243 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 HERV-K104P61576 105 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 IL15RAQ13261 267 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 SPERTQ8NA61 448 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 OR5P3Q8WZ94 311 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 OR2J1Q9GZK6 312 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 DECR2Q9NUI1 292 aa13.67□□□□□ -0.22
CNKSR1-202ENST00000374253 PHF1O43189 567 aaPredicted RBP13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 ZP3P21754 424 aa13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 GLP1RP43220 463 aa13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 C20orf204Q6ZNR8 217 aa13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 MKXQ8IYA7 352 aa13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 OR1S2Q8NGQ3 325 aa13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 SECTM1Q8WVN6 248 aa13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 INTS1Q8N201 2190 aaKnown RBP13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 AGFG2O95081 481 aa13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 PPYP01298 95 aa13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 TMEM187Q14656 261 aa13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 SPIN3Q5JUX0 258 aa13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 TMEM211Q6ICI0 200 aa13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 LHFPL5Q8TAF8 219 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms