RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 PLCXD3Q63HM9 321 aa17.18■□□□□ 0.34
CRLF3-201ENST00000324238 LIAT1Q6ZQX7 453 aa17.18■□□□□ 0.34
CRLF3-201ENST00000324238 NAT6Q93015 286 aa17.18■□□□□ 0.34
CRLF3-201ENST00000324238 PCED1AQ9H1Q7 454 aa17.18■□□□□ 0.34
CRLF3-201ENST00000324238 PARPBPQ9NWS1 579 aa17.18■□□□□ 0.34
CRLF3-201ENST00000324238 LUZP4Q9P127 313 aa17.18■□□□□ 0.34
CRLF3-201ENST00000324238 HS3ST3B1Q9Y662 390 aa17.18■□□□□ 0.34
CRLF3-201ENST00000324238 R4GN57 208 aa17.18■□□□□ 0.34
CRLF3-201ENST00000324238 BOD1L1Q8NFC6 3051 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 NSG1A0A0A6YYJ2 146 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 LIFP15018 202 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 RGS19P49795 217 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 ZNF133P52736 654 aaPredicted RBP17.17■□□□□ 0.34
CRLF3-201ENST00000324238 HAGHQ16775 308 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 CXorf66Q5JRM2 361 aaPredicted RBP17.17■□□□□ 0.34
CRLF3-201ENST00000324238 MYPOPQ86VE0 399 aaPredicted RBP17.17■□□□□ 0.34
CRLF3-201ENST00000324238 CRIM1Q9NZV1 1036 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 URGCP-MRPS24S4R325 110 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 ZFHX4Q86UP3 3567 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 BORCS7-ASMTA0A0B4J1R7 106 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 CXCL13O43927 109 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 RFPL3SP0C7P2 107 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 SULT1A1P50225 295 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 RUNX1Q01196 453 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 MRPL14Q6P1L8 145 aaKnown RBP17.17■□□□□ 0.34
CRLF3-201ENST00000324238 SLC25A26Q70HW3 274 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 P4HA3Q7Z4N8 544 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 SKA3Q8IX90 412 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 OR1F12Q8NHA8 337 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 PLEKHA2Q9HB19 425 aa17.17■□□□□ 0.34
CRLF3-201ENST00000324238 SSSCA1O60232 199 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 PSG4Q00888 419 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 PPA1Q15181 289 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 OSR2Q8N2R0 312 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 C15orf54Q8N8G6 183 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 LILRB1Q8NHL6 650 aaPredicted RBP17.16■□□□□ 0.34
CRLF3-201ENST00000324238 HPSE2Q8WWQ2 592 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 DUSP23Q9BVJ7 150 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 KCNJ16Q9NPI9 418 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 FOXD3Q9UJU5 478 aaPredicted RBP17.16■□□□□ 0.34
CRLF3-201ENST00000324238 ADAMTS20P59510 1910 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 C5orf52A6NGY3 159 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 RRP8O43159 456 aaKnown RBP17.16■□□□□ 0.34
CRLF3-201ENST00000324238 ST8SIA3O43173 380 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 IZUMO4Q1ZYL8 232 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 RPS19BP1Q86WX3 136 aaKnown RBP17.16■□□□□ 0.34
CRLF3-201ENST00000324238 OR14L1PQ8NHC6 308 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 PAPOLGQ9BWT3 736 aaKnown RBP17.16■□□□□ 0.34
CRLF3-201ENST00000324238 ZNF700Q9H0M5 742 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 SYNGR3O43761 229 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 GPR137BO60478 399 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 CRYGSP22914 178 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 PLA2G5P39877 138 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 P2RY1P47900 373 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 CEACAM16Q2WEN9 425 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 ZNF565Q8N9K5 539 aa17.16■□□□□ 0.34
CRLF3-201ENST00000324238 TRAV20A0A0B4J274 112 aa17.15■□□□□ 0.34
CRLF3-201ENST00000324238 H3BP45 60 aa17.15■□□□□ 0.34
CRLF3-201ENST00000324238 RAB5AP20339 215 aa17.15■□□□□ 0.34
CRLF3-201ENST00000324238 HERV-K104P61576 105 aa17.15■□□□□ 0.34
CRLF3-201ENST00000324238 SRYQ05066 204 aa17.15■□□□□ 0.34
CRLF3-201ENST00000324238 FAM27BQ5VT28 67 aa17.15■□□□□ 0.34
CRLF3-201ENST00000324238 C18orf12Q96KH6 178 aa17.15■□□□□ 0.34
CRLF3-201ENST00000324238 IGHV1-45A0A0A0MS14 117 aa17.15■□□□□ 0.34
CRLF3-201ENST00000324238 IGSF23A1L1A6 192 aa17.15■□□□□ 0.34
CRLF3-201ENST00000324238 KLF7O75840 302 aaPredicted RBP17.15■□□□□ 0.34
CRLF3-201ENST00000324238 EWSR1Q01844 656 aaKnown RBP eCLIP17.15■□□□□ 0.34
CRLF3-201ENST00000324238 ZNF343Q6P1L6 599 aa17.15■□□□□ 0.34
CRLF3-201ENST00000324238 OR2G3Q8NGZ4 309 aa17.15■□□□□ 0.34
CRLF3-201ENST00000324238 ZNF845Q96IR2 970 aaPredicted RBP17.15■□□□□ 0.34
CRLF3-201ENST00000324238 A0A096LPE4 126 aa17.14■□□□□ 0.33
CRLF3-201ENST00000324238 A0A1W2PPZ6 126 aa17.14■□□□□ 0.33
CRLF3-201ENST00000324238 IFNA4P05014 189 aa17.14■□□□□ 0.33
CRLF3-201ENST00000324238 SSR4P51571 173 aa17.14■□□□□ 0.33
CRLF3-201ENST00000324238 SUCLG1P53597 346 aaKnown RBP17.14■□□□□ 0.33
CRLF3-201ENST00000324238 LYPD6BQ8NI32 183 aa17.14■□□□□ 0.33
CRLF3-201ENST00000324238 SLC7A10Q9NS82 523 aa17.14■□□□□ 0.33
CRLF3-201ENST00000324238 MT-ND4LP03901 98 aa17.14■□□□□ 0.33
CRLF3-201ENST00000324238 HIST1H3AP68431 136 aa17.14■□□□□ 0.33
CRLF3-201ENST00000324238 HIST2H3PS2Q5TEC6 136 aa17.14■□□□□ 0.33
CRLF3-201ENST00000324238 HIST2H3AQ71DI3 136 aa17.14■□□□□ 0.33
CRLF3-201ENST00000324238 ABHD3Q8WU67 409 aa17.14■□□□□ 0.33
CRLF3-201ENST00000324238 TMEM171Q8WVE6 324 aa17.14■□□□□ 0.33
CRLF3-201ENST00000324238 RNF122Q9H9V4 155 aa17.14■□□□□ 0.33
CRLF3-201ENST00000324238 UBE2J1Q9Y385 318 aaPredicted RBP17.14■□□□□ 0.33
CRLF3-201ENST00000324238 LOC102725191A0A1B0GVB3 256 aa17.13■□□□□ 0.33
CRLF3-201ENST00000324238 H7C1Q1 480 aa17.13■□□□□ 0.33
CRLF3-201ENST00000324238 HSD17B6O14756 317 aa17.13■□□□□ 0.33
CRLF3-201ENST00000324238 TOX3O15405 576 aaPredicted RBP17.13■□□□□ 0.33
CRLF3-201ENST00000324238 FABP1P07148 127 aa17.13■□□□□ 0.33
CRLF3-201ENST00000324238 SCTP09683 121 aa17.13■□□□□ 0.33
CRLF3-201ENST00000324238 COX6A1P12074 109 aa17.13■□□□□ 0.33
CRLF3-201ENST00000324238 TSC22D1Q15714 1073 aa17.13■□□□□ 0.33
CRLF3-201ENST00000324238 WIPI1Q5MNZ9 446 aaPredicted RBP17.13■□□□□ 0.33
CRLF3-201ENST00000324238 LGI3Q8N145 548 aa17.13■□□□□ 0.33
CRLF3-201ENST00000324238 GSN-AS1Q9NRJ2 163 aa17.13■□□□□ 0.33
CRLF3-201ENST00000324238 KIAA2026Q5HYC2 2103 aa17.13■□□□□ 0.33
CRLF3-201ENST00000324238 ZNF724A8MTY0 619 aa17.13■□□□□ 0.33
CRLF3-201ENST00000324238 S100A9P06702 114 aaKnown RBP17.13■□□□□ 0.33
CRLF3-201ENST00000324238 EPHA1P21709 976 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms